KEGG   Lytechinus pictus (painted urchin): 129279331
Entry
129279331         CDS       T09066                                 
Name
(RefSeq) replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
lpic  Lytechinus pictus (painted urchin)
Pathway
lpic03030  DNA replication
lpic03410  Base excision repair
lpic03420  Nucleotide excision repair
lpic03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lpic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129279331
   03410 Base excision repair
    129279331
   03420 Nucleotide excision repair
    129279331
   03430 Mismatch repair
    129279331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpic03032]
    129279331
   03036 Chromosome and associated proteins [BR:lpic03036]
    129279331
   03400 DNA repair and recombination proteins [BR:lpic03400]
    129279331
DNA replication proteins [BR:lpic03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    129279331
  DNA Replication Termination Factors
   ELG1-RFC complex
    129279331
Chromosome and associated proteins [BR:lpic03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    129279331
DNA repair and recombination proteins [BR:lpic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     129279331
  Check point factors
   HRAD17(Rad24)-RFC complex
    129279331
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_assoc_2 DNAX_ATPase_lid Histone_HNS_N AAA_22 SNARE
Other DBs
NCBI-GeneID: 129279331
NCBI-ProteinID: XP_054771396
LinkDB
Position
16:complement(30945655..30961258)
AA seq 266 aa
MYRSRVLELNASDERGIQVVRDKVKKFAQTAAGGVRPDGKPCPPFKIIILDEADSMTNDA
QAALRRTMEKQSKNTKFCLICNYISRIIEPLTSRCSKFRFKPLSKPIQGKKLREICEAEN
ITCGDEALDAILKLSEGDMRKSITFLQSAHRLQREDGILVDDIYEIAGVIPDRIIDNLIQ
ACYGGSYEKLDENVQQLLQDGYSASQVVNQVFDVIVERGELTNKQKSAIAERLAVIDKRL
CDGADEGLQIMDLFTLTMDQFCTVQN
NT seq 801 nt   +upstreamnt  +downstreamnt
atgtatcgaagccgtgttctagaactgaatgcctcagatgaacgaggtatccaggttgta
agagacaaggtcaagaaatttgctcagactgcggcgggtggagtcaggccagatgggaaa
ccatgccctcctttcaagatcatcatattagatgaagctgattcaatgaccaatgacgct
caggctgcccttaggagaacaatggagaagcaatcaaagaatacaaagttttgtctcatc
tgtaattatatcagcaggattatagagccgctgacgtcgcgttgctccaagtttcggttt
aagcctctcagtaaacccatccaggggaagaaactaagggaaatctgtgaagctgagaac
atcacatgcggtgacgaggctttggacgccattttgaaattatcggaaggagacatgagg
aaatccatcaccttccttcagagcgctcatcgtcttcaacgagaggatggcatcctggtt
gatgatatctatgagattgccggggttatcccagatagaatcatagataatctcattcag
gcctgctatggtggttcctatgaaaagctagatgagaatgtccaacagctgctccaagat
ggctactcagcatctcaggttgtcaaccaggtttttgacgtcatagtggaaagaggagag
ctcactaataaacagaagtcggccatcgccgagcggcttgccgtcatcgacaaacgactg
tgcgatggagcggacgaaggcttgcaaatcatggatctgttcacactgaccatggatcaa
ttctgcactgtgcagaactag

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