Lytechinus pictus (painted urchin): 129279378
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Entry
129279378 CDS
T09066
Name
(RefSeq) autophagy-related protein 16-1-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04136
Autophagy - other
lpic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129279378
04136 Autophagy - other
129279378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129279378
03029 Mitochondrial biogenesis [BR:
lpic03029
]
129279378
Membrane trafficking [BR:
lpic04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
129279378
Others
Rab GTPases of specific organelles
Auto phagosome
129279378
Mitochondrial biogenesis [BR:
lpic03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129279378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
NBCH_WD40
FlaC_arch
CBM-like_2
Motif
Other DBs
NCBI-GeneID:
129279378
NCBI-ProteinID:
XP_054771445
LinkDB
All DBs
Position
16:11176831..11204292
Genome browser
AA seq
600 aa
AA seq
DB search
MALNVNMATSMDPSMSWKKTIQMRVRRRNERESLPFKSLIETHIKFSNQIEASRSQNVQL
QVQVERLQQENTELQSKGLSSPGPVENLGKGSAAYRQLEQKCFKLNEELTDVHRKKGENA
QQLIDLTAVLKTKETELQKNEESLNEALIRVGAYEDEIRNLETAVLELRKTNENLKDELQ
NMTLLCTKNEEALYKLQAENAELVTRVMDEKGRDADRLNSTNAIIQEVLNDKLKKELEEA
ASEKPTPKQESRSSAAATAPENKIFRRSPSWMMKFGPGSMSASTLPRGPILPPPISFVMS
VPDKNIAQFEAHDGEVHTVKFCPSGNFFATGGADRQLKLWEFLNNSCQNRGVLLGSNLAV
TCIDFDDQEQLILGAANDCAIRIWGTHDHRLRQTLTGHSNKVLAAKFLSDPNKFVSGSHD
RTLKIWDLKSRACTRTMFAGSMCNDLVTSDGAGTNIISGHVDKKIRFWDARSNARTKEIQ
LNGKVTSLDLSPDRQFLLSCTREDTLKIVDLRMYQVITSCSAEGFNVGCDYTRAAFSPDG
EYVTAGSQDGSIFYWKAKNGEIEKQIKDHKGPVICVSWHPSGRQLISCDRAKNVILWADF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaatgtcaacatggcgacttccatggacccttcgatgtcatggaaaaagacg
atacaaatgcgggtaaggagaagaaacgaaagggaaagtcttccattcaagtcactgatc
gaaacacatatcaaattttccaaccagattgaggcatctcgctcacagaatgtccagctc
caggtccaggtggagcgcctccagcaggagaacacagagctccagtctaaaggactctca
agccctggcccagttgagaaccttggaaaaggcagtgcagcataccgccagctagaacaa
aagtgtttcaagctaaacgaagaactcaccgatgtgcacagaaagaaaggggagaatgct
cagcaactgatagaccttacagctgtactcaaaacaaaggaaacagagttacagaagaat
gaagaaagtttgaatgaagcccttatcagagtcggtgcttatgaagatgaaattaggaat
ctggaaacagctgttctagaacttagaaaaacaaatgagaacttaaaagatgaactacag
aacatgacgttactctgcaccaagaacgaggaggccctctacaaacttcaagcggagaac
gcagagcttgtcacaagggtgatggacgagaagggaagggatgcagaccgtctcaacagc
accaatgctatcatccaggaagttctgaatgacaagttaaagaaagaattagaggaagct
gcttcagagaagcctacaccaaaacaagaatcacgaagcagtgctgccgctactgccccg
gaaaacaaaatatttcgcagatcaccgagttggatgatgaaatttgggccaggttcgatg
tcagcatccactcttccaaggggccccatcttgccaccccctatctccttcgtcatgagt
gtgcctgacaaaaatattgcccagtttgaagcacacgatggtgaggttcacaccgtcaag
ttctgtccttcagggaatttctttgccacgggtggtgccgacagacaactcaaactttgg
gaattcttaaataattcttgtcaaaatcgaggtgtacttctcgggagcaaccttgcggtg
acgtgtatcgactttgatgatcaagagcagctcattcttggggcagccaacgactgtgcc
atcaggatatgggggacgcatgatcataggttacggcaaaccttaacgggccatagcaat
aaagttttagctgcaaaattcctcagtgatcccaacaagtttgtttctggaagccatgac
aggacactgaagatttgggatctcaaaagtagagcatgtacacgaacaatgttcgcaggt
tccatgtgcaacgatctagtaacaagtgatggtgccggcaccaatataatcagcggtcac
gtggacaaaaagatcaggttctgggatgcgagatcaaatgcaagaacaaaagagatccaa
ctcaatggtaaggtgacctctcttgacctttcacctgaccggcaattcttattatcctgt
acaagagaggacacattaaagattgtagatcttcgcatgtatcaagttatcacgtcctgt
agtgcggaaggcttcaatgtggggtgtgactataccagagcggccttcagccctgacggt
gaatacgtgacggcgggctcacaagatggatcaatattctactggaaggcaaagaacgga
gagatagaaaaacagatcaaggatcacaagggaccagtgatatgtgtttcatggcatccg
tccggcaggcaactcatcagctgcgatagagccaagaatgtcatactctgggccgacttt
tga
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