Lytechinus pictus (painted urchin): 129280042
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Entry
129280042 CDS
T09066
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129280042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129280042
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpic04147
]
129280042
Membrane trafficking [BR:
lpic04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
129280042
Exosome [BR:
lpic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129280042
Exosomal proteins of other body fluids (saliva and urine)
129280042
Exosomal proteins of colorectal cancer cells
129280042
Exosomal proteins of bladder cancer cells
129280042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
DUF2385
SAM_CEP-1_C
HHH_3
Motif
Other DBs
NCBI-GeneID:
129280042
NCBI-ProteinID:
XP_054772075
LinkDB
All DBs
Position
17:11200806..11211404
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AA seq
227 aa
AA seq
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MHNDVIFFLYNTHAASTTSHRPELYEEVKLYRNVREREKYDNMAELFAVINTLEWLEKAY
IRDAVPAKEYTGSCSKLLMQYKAAFRHVKGEFTSVEDFMKKYRMNCPAAMERIKEDRPIT
IKKDDGNTSECIAQIVSLFITVMDKLRLDMKAVDEVEPEVKELSETMGRMGSLPAEYDGK
EKISKWLKTMGSMRAAEELSEEQIRQLLYDLDSAYNSFMRILSGASQ
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcataacgatgtgattttttttctttataatacccatgcagcatcaacaacaagccat
cgtccagaactatatgaggaggtgaaactatacagaaatgtgcgagagcgagagaaatat
gacaacatggcagagctatttgcagtgatcaacactttggaatggcttgagaaagcgtac
attcgagatgcagttcctgctaaagaatacacagggtcatgttccaagcttctaatgcag
tacaaggcagcgtttagacatgtcaagggggagttcacatcagttgaagacttcatgaag
aaatacaggatgaattgcccagctgcaatggagaggataaaagaagaccgaccaatcaca
attaagaaagatgacgggaataccagcgaatgcatcgctcaaatagtatcgttattcatc
actgtaatggacaagctgcggctggatatgaaggcggtggacgaggtcgagccagaggtc
aaggaacttagcgagaccatgggtaggatggggtcactaccagctgaatatgatggcaaa
gaaaagattagtaaatggttaaagacgatgggttcaatgagggcagcagaagaactatct
gaagagcagatccgacaactcctctacgaccttgactctgcgtataacagcttcatgaga
attctatcgggtgcatcacaatga
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