Lytechinus pictus (painted urchin): 129280431
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Entry
129280431 CDS
T09066
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129280431
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lpic01009
]
129280431
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129280431
03029 Mitochondrial biogenesis [BR:
lpic03029
]
129280431
Protein phosphatases and associated proteins [BR:
lpic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129280431
Membrane trafficking [BR:
lpic04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129280431
Mitochondrial biogenesis [BR:
lpic03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129280431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
129280431
NCBI-ProteinID:
XP_054772433
LinkDB
All DBs
Position
17:complement(34426072..34459174)
Genome browser
AA seq
1440 aa
AA seq
DB search
MLYVFLVNTGEMLTLDMALTMESVQQLHDTLSDDYQIPHEKQVLLISGGQSLDPQMRVCS
YSAGTDTNPIFLFSKGTIESANPPVTTSMSQTKEDNLKLQVEGLKNLPPSYSAVVARTQL
ALQFHEVAKEKLRVCEGLIHNQHLQQQGWMAVIANLDDITSAFQQRALVFQQNIADFLTD
RPNFLQRLEEFGDIIHILEKTPLLPCLREGGRSPSDHEGRDISLMMWISRQDQRSTLQQM
AVQCSKVLDQFNQPVLDALGSDIKSCLEAVSNPGMKEIKGLGERLFGLEQLLLQARKLLN
EQAEMAQGLVQNQTRASNVKDPSVLPDLCLSHQQQLTVMYKKHLQLIDMSRRCEIAKEEL
CQNLHVRLRWVMYVEQQVSSVHGKMLVYHENLKRLRKRLEIIRQVCMTPKLYASAVVEVC
RRRHYNTQYQEWSGRISETSVCEHAEELKRRKEFASLMHNHFLNALFPGFYELPPTFATT
PPGNYDNSLPNIMDKDILLLREKVPELAESLELPSNQHFSCVTSLHTKQLPSRPLSIEIE
TQTELVSEELSCHPPPSPPPQPLTENNAEAISDQTSKDNDSDGAITLEDGKDPRDRPGLE
SQLSQPRLLSLDMIQTNDIILSPDTPELDAKFESVYRDAPFSSLLPEVDSEFHSAIGSPM
DEGLVKKAKMDQILPVLRPMEENQTLKQQLQEREKILEELEERKMVLEKKLSDSESMIGD
LQESVSTRSQRLEESENTVDCLNEVVQAHVTELRTKCESIKKSVVDTRQQMKIEVLEAVA
KITEYSNQVSKDSERRHVIAIQKAIDQTQAGLEKEKEVLSKQIFDLNGQLEVANQKLMDL
ECKVREKESSSEMLKSKYQQDLEEVKTKLEEDEKQMIASMKMELEMEITDLEANIEEKEK
EIRQLQIESVQRQQETTAKLREEKLQELDNLRKEMGAFHKSELNKLEMALHSRHVDEFAD
FKKSSTLQTESELEKQRKHLMEECSEAIKTMEKEAEERLRTAREEMQASCQKTLEEEQKQ
GLDAMEKQKKEMEERTKEINDQKKKHEEEMRKIEDEWKEKFLKEFRELEELNERRMEEAR
RQHEVEMERRQTEETQGIERIKKEMESQFETRLAEVTSSRDKHEAKVQNLQEVLSQLKAE
TCQKEEELNAKWAESIAVEKSSCVEAAVEEERKEGEKRLRALRERLEEEKQEGIRIAVEM
AKFDQSQNDAEQTASSSSTESTSSMASTSLSASQQQVSFNKAIAKVAATKDKRIAELEAR
ERESMEEQRRSKDTIEKLLMDKTDLDTELRAAVLKAQEREWQAIREKERLEEQMRKSGDL
AAGNEDDRGSPAEMVVSTQSDGLMEITETRDQLKALLHTKEQECSTLKRQLIHMRTSSPG
GRMEKVAISDISLGDLVFIVFQEGQENYMVYSLEPTLYFLHTESLSALGLRSKGQAVAKL
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgtttttcttgtgaacacgggagagatgctgacactggatatggctctcact
atggagagcgttcagcagcttcatgatactctgtcagatgactatcagatccctcatgag
aagcaagtcttattgatcagtggagggcagagtttagatccacagatgagagtatgcagt
tacagtgctggcacagacactaaccccatcttcctgttcagtaaagggaccatagaatca
gcaaatccgccagtgactaccagcatgtcacagacgaaggaagacaacctcaagctccag
gtcgaaggactcaagaacctgcctcctagctacagtgctgtagtggcacgcacccaacta
gccctgcaattccatgaagtagccaaggagaaattgagggtctgtgagggattaatacac
aatcaacatttacaacaacaaggttggatggctgttatagctaacttggatgacattact
agtgcctttcaacaaagagcactcgtcttccagcagaacatagcagacttcctcactgac
agacccaactttcttcagcgccttgaagagtttggagacatcattcacatccttgagaag
acaccgcttctaccttgcctcagggagggtggtcggtctccatccgaccacgaggggagg
gatatatctcttatgatgtggatcagtagacaggaccagaggagtactctacaacaaatg
gctgtgcagtgtagtaaagtacttgaccagtttaatcaaccagtccttgatgccttgggc
agtgatattaaatcatgcttagaggctgtaagtaacccaggaatgaaggaaatcaaaggt
cttggagaaagactatttggtctagagcagctgttattacaagctcgtaaactcctcaat
gaacaggctgaaatggctcaggggctcgttcagaaccagacccgcgctagtaatgtgaaa
gacccctcagtgctaccagacttatgcctgagtcaccagcagcagctaacggtcatgtat
aagaagcatctacaactcatagacatgagcaggagatgtgagatagcaaaggaggagctc
tgtcaaaacctacatgtgagattaagatgggtaatgtatgtagaacagcaggtcagcagt
gtgcatggtaagatgttggtataccatgagaacctgaagagactacgcaaacgtttggag
ataatccgtcaggtctgcatgacgccaaagctctacgcttctgccgtagtagaggtgtgc
aggagacgccactacaacacacagtatcaagagtggtctgggaggattagtgagacatct
gtgtgtgaacatgcagaagaattgaagaggagaaaagagtttgcttcacttatgcataac
cacttcctcaatgcactcttccctgggttctatgaactgcctccaacttttgcaaccaca
ccccctggtaactatgacaactcattacctaatatcatggacaaagatattcttctactc
agggaaaaggtgcctgaattagctgaaagtctagagcttccatccaatcaacacttctca
tgtgttacctcactacatactaagcagctgccatctcgtccactctcgatagagattgaa
actcagaccgaactcgtttccgaggaactttcatgccatcctccgccctcaccgcctcca
cagcctcttactgaaaacaacgctgaagctatctctgatcaaacttcaaaagataatgac
tctgatggtgcaattacactcgaggatggcaaggatccgagggatagaccaggtttagaa
agtcaactcagccagccaaggctgttatctcttgacatgatccagacgaacgatattatt
ctgtctccagacacgccagagcttgacgcaaagtttgagtccgtttacagggatgcgcct
ttctcgtctctgcttcccgaagtcgacagtgagtttcattcggcgatcggtagccccatg
gatgaaggtttggtgaagaaggccaagatggatcagatcctgccggttcttagacccatg
gaggagaaccagaccctgaaacaacagctccaggagagagaaaagatcctggaagagctg
gaagagaggaagatggtccttgagaaaaagctcagcgattcagaatccatgattggtgac
ctgcaggaaagtgtaagcactcggtcgcaacgtcttgaggaatctgagaacaccgttgac
tgcctgaatgaggttgttcaagcacatgttacggagcttagaacaaagtgtgaaagtatc
aagaagtctgtggtagacaccaggcaacagatgaaaatagaggttctagaagcagtggct
aaaatcacagaatattcaaaccaggtcagcaaagattctgagagaagacatgtaatcgcc
attcaaaaagccattgatcaaacgcaagcaggcctggaaaaagagaaggaggtgctaagc
aaacagatctttgatcttaatggacagttagaggtggctaatcaaaaactgatggacctt
gaatgcaaggtcagggagaaggagagcagttctgagatgctcaagtctaaataccaacaa
gaccttgaggaggtgaagacaaagttggaagaggatgagaagcagatgattgcatccatg
aagatggaattagagatggagatcacagacttggaagcaaacatagaggagaaagagaaa
gaaataaggcagctccaaatagaatctgttcagaggcagcaggaaacgactgcaaagctc
cgagaagagaagctgcaggaacttgataacctgaggaaggaaatgggggcattccacaag
agtgagttgaataaacttgaaatggcattgcacagcagacatgttgacgagtttgctgac
tttaagaaatccagtacattgcagacggagagtgagttagaaaaacagagaaagcatttg
atggaggagtgcagtgaagccattaaaacaatggagaaagaagcagaagagagattaagg
acagctagggaagagatgcaggcatcttgtcagaagacactggaagaagaacagaagcaa
ggtctagatgcgatggaaaagcagaagaaagagatggaggagagaaccaaagaaattaat
gatcaaaagaagaagcatgaggaagagatgaggaaaatagaagacgaatggaaggagaag
ttcctgaaggagttccgcgagttagaggaattgaatgagaggaggatggaagaagcaaga
aggcaacatgaagtggagatggaaagaagacagacggaagaaacacaaggtattgagagg
ataaaaaaggagatggagagccaatttgagacaagacttgctgaggtgacatcctcaaga
gacaaacatgaagccaaagtgcagaatcttcaagaagttctatcacaactcaaggcggaa
acttgtcagaaggaggaggagcttaatgctaagtgggcggagtctatcgccgtggagaaa
agcagttgtgtggaggctgctgtggaagaggagaggaaagagggagagaaacggttaaga
gctttgagggagagactggaggaggagaaacaggaaggtatcaggattgcagtagagatg
gccaagtttgaccaaagccagaatgatgcagaacagactgcatccagttcttctaccgag
agcacatcttcaatggcttccaccagtctatcggctagtcaacaacaggtgtctttcaac
aaggctattgcaaaggtggctgccacaaaggataaacgtattgcagaactagaggctaga
gagagggaatcgatggaggagcagcgcagatctaaagacactattgagaagctattgatg
gacaagactgaccttgatacggaactcagagcggccgtactcaaggctcaagaaagggaa
tggcaggccatcagggagaaagagagacttgaagaacagatgaggaagagtggggatctt
gctgcagggaacgaagatgacaggggtagtccagccgagatggtagtttctacacaaagt
gatggtctgatggagattactgaaacaagagaccaactcaaagctctacttcataccaaa
gaacaagaatgcagcaccctcaaaagacaactgatccacatgaggacatcatcaccgggt
ggtaggatggagaaagttgctatctcagatatcagtcttggagatttggtgttcatcgtt
tttcaagaaggacaggagaactacatggtgtacagtctagaaccaaccctgtatttccta
cacactgaatcactgagtgctctaggtctcagatcaaagggacaagctgtagcaaagttg
taa
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