KEGG   Lytechinus pictus (painted urchin): 129280637
Entry
129280637         CDS       T09066                                 
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
lpic  Lytechinus pictus (painted urchin)
Pathway
lpic03082  ATP-dependent chromatin remodeling
lpic03083  Polycomb repressive complex
lpic04330  Notch signaling pathway
lpic04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:lpic00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129280637
   03083 Polycomb repressive complex
    129280637
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    129280637
   04350 TGF-beta signaling pathway
    129280637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lpic03036]
    129280637
Enzymes [BR:lpic01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     129280637
Chromosome and associated proteins [BR:lpic03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     129280637
   HDAC complexes
    Sin3A-HDAC complex
     129280637
    BRAF-HDAC complex
     129280637
    REST complex
     129280637
    SHIP complex
     129280637
    MiDAC complex
     129280637
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     129280637
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129280637
  Chromatin remodeling factors
   NuRD complex
    129280637
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 129280637
NCBI-ProteinID: XP_054772636
LinkDB
Position
17:complement(40032563..40047413)
AA seq 529 aa
MKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTKYHSDDYVKFLRTIRPDNMSEYTK
QMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMSKVMEMYQPSAICLQCGADSLSGD
RLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTIRNVARCWTYETSTALGVEIANELP
YNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPEDAI
PDDSDAEDEAENPDKRISIMAQDKRISRDDEFSDSEDEGEGGRRDHRSHKAKRSKMEEGP
GKEVDKESKSSDTTKELKPADQQAIPMDTTPAPQAKKSDDKPEASKPSEGKAKPPEKEQG
EASPADQSVPAPKVTAPTEGTTPAIGNLSSGPAQPAAAPTVTPATEKQD
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgaaaccgcatagaatacgtatgacacataatctcatactcaactatggactctacaga
aagatggaaatctacagaccacacaaagcagtaatggaggagatgacaaaataccacagt
gatgactatgtcaaattcttgagaaccattcgacctgataacatgtctgaatacactaaa
caaatgcaaagattcaatgtaggtgaagattgtcctgtatttgatggtctctatgagttc
tgtcagctctcatccggtggttcagtagcgggtgctgtgaagctcaacaaacaacagaca
gacattgcaatcaactgggccgggggtctccatcatgcaaaaaaatcagaagcatcagga
ttctgctatgttaatgacatcgtactggcaatccttgaattactcaaataccatcagaga
gttttgtacatagacatcgatattcaccatggtgacggagtagaagaagctttctatacg
acagaccgtgttatgaccgtgtcctttcacaagtatggtgaatacttccctggtactgga
gaccttagggatattggagcagggaaagggaaatactatgcagtcaactttcctctcaga
gatggcatcgatgatgaatcttatgacaagattttcaaaccaatcatgtctaaagtaatg
gagatgtaccaacccagtgctatatgccttcagtgtggagcagattcattatcaggagac
aggcttggatgcttcaatctaacactcaaaggtcatgctaagtgtgttgaattcatgaag
cagtataacctacccctattgctgatgggtgggggtggttacacgatacgaaacgttgca
agatgctggacgtacgagacctccacagccttgggagttgagattgctaacgaattgcca
tacaatgattactttgaatattttggaccagacttcaaacttcacattagtccttctaac
atgaccaatcagaatacaggagaatacctcgataaaatcaagactcgcctatatgagaac
atgcgcatgataccccatgcaccgggtgttcagatgcaacccatcccagaggatgccatc
cctgacgatagcgacgctgaagacgaggcagagaacccagacaaacgcatctcaatcatg
gctcaagataaacgtatctctcgtgatgatgagttctctgacagtgaagatgagggtgag
ggcggtagacgtgatcatagatcacacaaagccaagagatctaagatggaagagggacca
ggcaaagaggttgataaagaatcaaagtcaagtgatacaacaaaggaactgaaacctgct
gatcaacaagccattccaatggatacaactcctgcacctcaagccaagaaaagtgatgac
aaaccagaagccagcaaaccttcagagggcaaggctaagccacctgagaaagaacaaggt
gaagcttctcctgctgatcagagtgtcccagcccccaaggtgaccgcccccaccgaagga
accacccctgccattggtaacctctcatcaggccccgcccagcccgctgcagccccgaca
gtcacccctgcgacagagaaacaagattga

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