Lytechinus pictus (painted urchin): 129280834
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Entry
129280834 CDS
T09066
Name
(RefSeq) GATOR complex protein DEPDC5-like
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
129280834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129280834
Membrane trafficking [BR:
lpic04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
129280834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IML1
DEPDC5_CTD
IML1_N
IML1_N_fung
DEP
Motif
Other DBs
NCBI-GeneID:
129280834
NCBI-ProteinID:
XP_054772814
LinkDB
All DBs
Position
2:44691567..44732359
Genome browser
AA seq
1555 aa
AA seq
DB search
MKNFKLWVHQKAFSENELLINPKEFPDVKIGDILEIYHPDEENSHLLLQVKSFKDELQQN
SKEIISVEQGVASLFQLRAYKNVKVTKVQSGDVALDLVELVFKDQYISRSDMWRLKNSLV
NSCIHMQQKLELSGIRAQVQELWSRWERVSCGAITNDTRVAFRSATAMVYLFIQMSSEMW
DFDTCGDLYWEKAVGGFLTDLFNKWKDKGVNNEVTVVLFSRTFFKAKSLAQFPKWMRDNV
KVDYVGRFYQDFYRAVVHHERRDEWHGLLQTLKAHFILYLKEVLCETQEGGSIPFGYNSS
AAEGNFLETLNMTLNVFDKHYVDRNFERTGQLVVLLTPGAGVFDVDREMCKITRQRMIDN
GIGSDLVCLAEQPLHAVPLFRFHNKTMDAGIHGGDYNIPHWLNYSFYTKEDAHGNNEKFK
PRIKLAERVYTSQAGNPLPTLVKECPQTMSRQALLRHISSDHSLSKQDDIDYQCEEYDDA
VFGFLSGKSPKPRTPATMRPSSGGQNRQRQAASIGQLILDKEGSPQNKWTKADFKDPSRR
GSSPGTKHGSYHSDDGDVAIAIPGRGNKANPLARIQREAKVVSHSFEGRRRESSESHAAS
ISPKGIVVGSAGATTTTHINHAGQAQPKALVNPFGTSSLVVKLTSNRRRWTHTFPQGPSG
GAIQTHHRNQINPSYYFSHYYPSNSYARHRNSSTLGSSPSSPHYPWAGPIINGGGSRTPT
DGNERPLLPPSSSENRLRPSASGSSLFSAGSSPSTDTVLQRPGSAGTRGLFDGPSSLDHA
MQHHPSLRRLNLLWSYTGDQEWTPYTLTGVDWKSLTATACLPISTDFYPDRLSLEKDFLE
FNYELLAEEDIIGPFMTVEAIFQELISQRLLQGFQLVVLPSLDLSSVIRSQRHPPLITNP
DKYWYVLSIGRIFHKLCLHVERKTISVTIYKPRHPSLCEPIQYTYQLWSVQNEGYSPIQT
TFRHEEIERYNWNYLDNYISSHDSEFSLASSGRQTPISGDLTHPGSRSSPGPDRQRHTSG
TGSPAPHPPNTPAAATIADEPLSLCTTLQVIAKAMADQSNGLRFIAPGQKGIPPNCFMSG
EAMTWVQRSLSGEVTDVEAFELLMNMSENRLIQHASGFPHIPFIHGFYVYCLVLPENVPP
MMDATKSHSWCDYIPQLPVNTDFPSHWFEVAVMEELSWKQKSTETSSSVVEDFHPVSPWA
MREMSGGTPGFGSMPASSRAFKPPEIKNVMLEIDCNKTDRVEWCHVTYDGQYTVDRAFDL
QVEWLVCTPSLLNEMLQGWSRKANTFGFHLVPAPTDPFHQHPEFANPLRCPLFIPLDIQS
LKEDVHRRHASGEEVLEGDGIADGGCMLGLEPGNKAIDLFQELIMNKFGFILIRDKNQDT
FDGFGFHASRRGRQMEYIHKSGVCFVSLINSPDDTPIVPSVTPSGQGRSSPCEVVKAPRR
RKSSGGIPIMVGRDSSFDIVDTVDDDEPDVTFVEERRKMRSGSIREVREKHMDGQFNNVG
FLWSMNHTLTKRWRCSACGDEKVYDSIMKEVISISRNVDGKLTDFWLENTENLSF
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttcaagctttgggtccatcaaaaggcatttagtgagaatgaattactgatc
aaccccaaagagtttcctgatgtaaagataggtgacatcttggaaatatatcatccagat
gaagaaaatagtcatctgctattacaagtcaaatccttcaaagatgagcttcaacagaac
agtaaagaaataataagtgtggaacaaggagtggcatcattgttccagctgagggcttac
aagaatgtgaaggtcaccaaagtccaatctggagatgtagccctagacctggtggagttg
gtcttcaaagaccagtacatcagcaggagtgacatgtggagactcaagaacagtctggtg
aacagctgtattcatatgcaacaaaagttggagctgagtggaatccgtgctcaggtccag
gaactttggtcacgttgggagagggtgtcctgtggagccatcaccaatgatacaagagtt
gcctttagatcagctacagccatggtctatctcttcattcagatgagttcagagatgtgg
gactttgatacatgtggagatctgtattgggagaaggcagtaggtggattcctgactgat
ctcttcaacaaatggaaggataaaggagtcaacaatgaggttactgtggtcctcttctct
cgcacattcttcaaagcaaagtcacttgcccagtttcccaagtggatgagagacaatgtc
aaagtggactacgttggccggttctaccaggatttctaccgtgccgttgtccatcacgag
agacgagatgaatggcatggtcttctccagactctcaaggctcactttatcctctacctg
aaagaagtcttatgtgaaacccaagaaggtggatcaataccttttgggtataattcatca
gctgccgaggggaacttcttggaaactctaaacatgactctcaatgtgtttgacaagcat
tacgttgaccgtaactttgagcggacgggtcagcttgtggtgttattaaccccgggagct
ggagtgtttgatgtcgacagggaaatgtgcaagataaccagacagagaatgatcgataac
ggtattggcagtgatctggtatgtctcgctgaacagcctctccatgcagtgcctctgttt
aggttccataataaaaccatggatgcgggtattcatggaggtgattacaacatccctcat
tggctcaactacagcttctacaccaaagaagatgcacatggaaataatgagaaatttaaa
ccaaggatcaagctagcagagagggtttacacgtctcaagctggaaacccccttcctacc
ctggtcaaggaatgtccgcagacgatgagcagacaggccctgttacgtcacatctcgtcg
gaccactccctttccaagcaggatgatattgattaccagtgtgaggagtatgatgacgca
gtctttggtttcctcagcggcaagtcgcccaaaccaaggacacctgcaacaatgcgtcca
tcatcaggaggtcagaatcgtcagcggcaagctgcatcgattggtcagttgattttagac
aaggaaggatcacctcagaacaaatggaccaaggcagacttcaaagatccaagcaggagg
ggtagctctccaggaaccaagcatggaagctaccattcagatgatggggatgttgcaata
gccattccagggaggggcaataaagccaatcctcttgccagaatacaaagagaagccaag
gttgttagccatagttttgaaggaagacgtagagagtcttcagagagccatgcggcttcc
atctctcccaaaggcatcgtcgtgggcagtgctggggctactactaccacccatatcaat
cacgccggtcaggctcagccaaaggcattggtcaatccgttcgggacatcaagtttagtg
gtcaaattgacctctaatagacgaagatggacacacaccttccctcagggcccaagtggg
ggcgccatacaaacccaccatcgtaaccagatcaacccgtcctactacttctcccattac
tatccgtccaactcatacgcccgccaccgaaactccagcaccctcggctcctccccctcc
agcccccattacccctgggccggtcctatcatcaatggcggtgggtcccgtacccctacc
gatggtaacgagagaccgttgttgccccctagttccagtgagaatcgactgcgcccatca
gccagtgggagcagcctcttcagcgctggctcgtctccgagtacagataccgtgttgcag
aggccaggtagtgcaggcacccgaggtctgtttgatggaccgagctccttggatcacgcc
atgcagcatcatccgtccctaagaagactcaacttactatggagttatacaggggatcaa
gaatggaccccttacaccctgacaggtgttgactggaagtccttgactgccactgcctgt
ctgcccatatcgactgatttctatcctgacaggttgtcattggaaaaggacttcctcgag
tttaactatgaactcttagcggaggaggacatcattggtccttttatgacagtggaagcc
atcttccaggagctcatatcgcaaaggcttctgcaaggttttcagttggttgtacttcca
agcctggatttgtcatctgttatccggagtcaacgtcatcctccattgatcaccaatcca
gataagtattggtatgttttgagtattggtcgtatcttccacaagctatgccttcatgtt
gaaagaaagacaatatcagtcaccatttataaaccaaggcatccatcactatgtgaaccc
atccagtatacctaccagctatggtctgtacagaacgaaggttactctccgattcaaacc
actttcagacatgaagagattgagaggtacaactggaactatcttgataactacatctca
tcacatgatagtgaattctcattggcatcatccggacgccagacacccatctcaggtgat
ctgacacaccctggtagtagatcctctcctggaccggatagacagaggcacaccagtggg
actggtagtcctgcaccccaccctcctaatacacctgctgctgctactatagctgatgaa
ccactttcactgtgcacaactctgcaggtcattgctaaagctatggctgatcaaagtaat
gggttgaggttcatcgcccctggacagaaggggattcccccaaattgcttcatgtcaggt
gaggctatgacctgggttcagaggtcattaagtggtgaggtgacggatgtcgaagccttt
gagctgttaatgaatatgtcagagaatcggttgatccagcatgcgtcgggcttccctcat
attcccttcatccacggtttctacgtctactgcttggtgcttccggagaatgtacctccc
atgatggatgcaaccaaatcgcattcatggtgcgattacatccctcagcttccagtcaac
acagacttccctagtcactggtttgaggttgccgtgatggaagagttgtcatggaaacag
aaatctactgaaacgagttccagtgttgtcgaggacttccatcctgtatcaccttgggcc
atgcgtgagatgtcaggaggtacgccaggctttggatccatgcctgctagtagtagagct
ttcaaaccaccagagattaagaacgttatgctggagattgactgcaataagactgaccgg
gtagagtggtgtcatgtgacatacgatggccaatacacagtcgatagggcatttgacctc
caggtcgagtggctagtctgcacacccagcctcttgaatgaaatgctccaaggatggtcg
agaaaagccaacacctttggattccacctggtccctgcccccaccgaccccttccaccag
catcccgagtttgccaaccccctacgttgccccctcttcatacccctggacatccagtcc
ttgaaggaggacgttcacaggaggcacgccagcggggaggaggtcctcgagggggatggg
attgccgacggtggatgcatgttgggtctggagcctggtaacaaggctatcgatctcttc
caggagctcatcatgaacaagtttggttttatcttaatacgagataaaaaccaggatacg
ttcgatggctttggtttccatgccagtaggcgtggtcgccagatggaatacatccacaaa
tcaggtgtatgtttcgtttccctcatcaactctccagacgacactcccatcgtccccagc
gtgaccccttccggccagggtcgaagctctccatgcgaggtcgtgaaggctcctcgacgg
aggaagtccagcggcggtatccccatcatggttggacgcgatagcagcttcgacattgtc
gataccgtggatgacgacgaacctgatgtgactttcgtggaggagaggaggaagatgcgg
agcggaagcatcagggaagttcgtgagaagcacatggatgggcagttcaataacgtaggg
tttctgtggtccatgaaccacacgctgaccaagagatggcgctgcagcgcttgcggcgat
gagaaggtgtatgacagtatcatgaaagaggtcatcagtataagccgaaatgtggatggt
aagctgactgatttctggcttgagaatacagagaacctgtcattttga
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integrated database retrieval system
