Lytechinus pictus (painted urchin): 129280910
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Entry
129280910 CDS
T09066
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
lpic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129280910
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129280910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129280910
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129280910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
129280910
NCBI-ProteinID:
XP_054772873
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All DBs
Position
17:5641975..5666408
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AA seq
1184 aa
AA seq
DB search
MATPSGGKFRPKRSHYSRKPYERPKPKSLLARVSDSVKDFITPSWLNNLWNNPNDDDGEG
SSRSSTPELPSQPDGPASGTPNFMPSAVATSTPDINLNLRTGKEALSEPGPPSMETTPIV
QFEEDVVKDGGRTVRNEDDDVVIIEEEQPSTSTGIRHTPLPFRNYANPIGTSTPNDDMQL
LGGRKQAVDKDDASDTSVSTSGCSSLVPHVDRVDHKEKLSKKNLDRLSEMGHSNSLAKSS
LWTDLSSAGPSSAGAAGLSSSRPQPSISSAKRPSFNSSYFGSPKLLGEPRPKHASPFYPG
RTQFGGSSAQRTALKRPRDSPYEVHLPVKRNIRPKPAQSSLQDGLGATSSTAKKILDTLE
RMSTPLLDAKKIPLSPTASPYSFRPTSRLSGRPGTSRVNTPPTAGLRVAHQASIKANRQP
PVSTATTVIDLEKEERVSAPSSDEVLPMSTGAPTISTAPSFRFGAPITSSTPAEPLSARE
KSGGKMKSKSRGAGHYSAQKAEQEVCEIPDLPAIPLPLTKGLPSFSFGSNLYSSTSSSTS
KPSTSSSTSISAASTKDSYLVSNRKNVSSKSSISATPAQSSTVPSFKFAAPTSTSAVTSI
SEGPQFTFASPIIKQTGSSSTSSSTNSSSTATTFKFSVPRQTPYSTSRPSTSAPVGGKKP
SFETPERTRRKGEDEDDVVEIKDDEVEEQQGGIKVAKELKTGSCLEVFGIKPTKNGPIPS
SSSKVQERSAKESKTKMDNGPATGILGQNSGASNIQNDKTLSIINKFKPPASSWECDTCL
IQNKEDASQCVACATPKPGQKATKSSTSSTPFGAKPNAIINKFKPSANSVECVTYSIQND
GNVSGSVGGMATKPGQSASKPAAPRVSDSKPPVVNSLAEKFKKKADEWDCDTCMIRNKEN
ADACVACMAPRPGKSKGGEATKTLPKEHAMNNTIAEKFKAKPGEWECDTCMIRNKATILK
CMACETPKPGSQPTLSAPPASSFKFGSTPLSNGDATGAFKFGNSTTTDLLNSNTNASSGG
FKLPAGLSLGQSIKPAASTDISAVTTSSSGGGFKLPTNFSLSKTLSNSSATDAKALSDVK
SVESSLLSQTKTEQKLEVKVPTGMKFRASSSESSSAGSGLKLTTGSSTGGFKFGQNNAST
DSSSSIGGGFKFGQSPATAGQTLLEKDGPPPNVNIFQTNETKKY
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccgtctggtggtaaatttcgcccgaaacgatctcactactcgcgtaaacca
tacgaacgtccaaaaccgaagtctcttttagctcgcgtctcggattcagtcaaggacttc
atcacaccatcctggctgaataatctctggaacaatcccaatgacgatgatggggaaggc
agctcgcgttcctcgaccccagagctgccctcccagccagacggaccagcatcaggcacc
ccgaacttcatgccttctgcggtggcaacaagcaccccagacatcaatctcaatcttcga
actggtaaagaggctctaagcgaacctgggccacctagtatggagaccacaccaatagtg
caatttgaagaggatgttgtaaaggatggcggtagaactgtcaggaatgaggacgatgat
gtggtcattattgaagaggagcaacccagtaccagtacaggaatcagacatactcccctg
ccgttcaggaactatgcgaatcctataggtacgtcaacaccgaacgacgacatgcagttg
ttgggcggaaggaagcaagccgttgacaaagacgatgcttctgatacatcagtgtcgacg
agtggctgctcttccctggtaccccacgtagacagggtcgatcacaaggagaagttatcc
aagaagaatctggatcggttatcagaaatggggcattccaactctcttgccaaaagcagt
ctctggacagatctgtccagtgccggcccctcttctgctggtgctgccggcctgtcatcg
tcgaggcctcagccatccataagcagtgccaagaggccatctttcaatagctcatacttc
ggctctcccaaactgcttggggaacccaggccaaagcacgcctctccgttctatccaggg
aggacacagtttggaggatcttcggcgcagcgtactgcccttaagaggcccagagattcg
ccatatgaggtgcacttaccagtcaagaggaatatccggcccaagccagcccaatcgagc
ctgcaggatggcttgggagcgaccagctcaacggctaagaagatcctggataccttggaa
aggatgtccacaccgctcctggatgccaagaagatccctctctctccaaccgcttcacct
tactcctttaggccgacaagccgactctcgggtcggcccggaacctcacgggtgaacact
ccacctacagccggtcttcgtgttgctcatcaggcaagcattaaagccaacaggcaacct
cccgtttccacggctaccacggtgattgatctcgagaaagaggaaagggtatcagctcca
tcaagtgatgaggtcctaccaatgagtacaggtgctccaacgataagcacagcgccatca
ttccgatttggagcacccatcacctcttcaactccagctgaacctctttcagccagggag
aagtctgggggcaaaatgaaatcgaagagcaggggtgcagggcattattcagcacagaaa
gctgagcaagaagtgtgtgagattccagatttacccgcgataccactacccctaaccaag
ggactcccatcattcagcttcggttcaaacttatactcctcaacctcatcgtcgacctcc
aaaccttcgacgtcatcatctacatccatctctgctgcctctacaaaggacagttatctt
gttagtaatagaaaaaatgtttcaagtaaaagcagcatatccgcaacccccgcccaatca
tcaacagtgccatcgttcaaatttgctgctccaacatcgacatcggcagtgacgtcgatc
tcggagggtccccagttcaccttcgcatctcccatcattaagcaaaccggcagcagttcc
acttcgtcctcaacgaatagttcttccaccgcgaccaccttcaaatttagtgtgccccgc
cagaccccttactcgacatccaggccctcgaccagcgcccccgttggcggaaagaaacca
agttttgaaacccccgagaggaccaggaggaaaggggaagacgaagatgatgttgttgag
atcaaagacgacgaggtggaagagcaacagggtgggatcaaggtggcaaaggagctcaag
acgggaagctgtctggaagtctttggtattaaacccaccaagaatggtcccattccatca
tcaagttcaaaagtgcaagaacgttctgccaaggaatccaaaacaaagatggacaatggt
cctgcaacgggaatcctcggtcaaaactctggtgcaagcaatattcagaatgacaagaca
ctttctatcattaacaagttcaagcctccggcgtcgtcatgggaatgtgacacgtgttta
atacaaaacaaggaggatgcgagccagtgtgtagcgtgtgcgacgccaaagcctggacag
aaggcgacaaaatcgtcaacgtcgtctacccctttcggagcgaagcccaatgcaatcata
aacaagttcaagccatctgcaaactctgtggaatgtgttacgtactcgatacaaaacgat
ggtaatgttagtggaagtgtggggggtatggcaacgaagccgggacaaagcgcctcaaaa
cctgcagctccaagagtatcggactccaagcctccagtcgtcaatagcctggccgagaaa
tttaagaagaaagcagatgaatgggactgcgatacatgcatgatccggaataaagagaat
gccgatgcatgtgtggcatgtatggctcccaggcctggcaaatcaaaaggtggggaggcc
acaaagacgctaccaaaggaacatgcaatgaataatacgatagcagagaagttcaaagca
aagccaggggaatgggagtgtgacacatgcatgatcaggaataaagcaacgatactcaag
tgtatggcgtgtgagactccaaagccagggagtcagcccacattgagtgcacccccagct
tcatcattcaagtttggtagtacacctttaagcaatggagacgcaactggtgcctttaag
tttggtaattccacaaccacggacttgttaaactcaaacacgaatgccagcagcgggggg
ttcaaactccctgctggtcttagcctagggcagagtataaagcccgctgccagcacggac
ataagcgcagtaacaacttcctcatcagggggtggctttaaattaccaacaaacttttct
ctgtccaaaacacttagcaactcatcagcaacagacgcgaaggccctgtcggatgtcaaa
agcgttgaatcgtcattgctaagtcaaacaaagacggagcaaaaactagaagttaaagtg
cccacggggatgaaattcagagctagctcatcggagtcgagctccgcgggcagtgggctc
aaattaactactggttcctccacaggagggttcaagtttggacagaataatgctagcact
gatagttcaagtagtataggaggtggattcaaatttggacaaagccctgccactgcaggg
cagacgctactagagaaagatggccctcccccaaatgtgaacattttccaaacgaacgaa
acaaaaaaatattga
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