Lytechinus pictus (painted urchin): 129281695
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Entry
129281695 CDS
T09066
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03440
Homologous recombination
lpic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129281695
03460 Fanconi anemia pathway
129281695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129281695
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129281695
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
129281695
FA (Fanconi anemia) pathway
Downstream FA components
129281695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ARCH_RTEL1
HBB
Motif
Other DBs
NCBI-GeneID:
129281695
NCBI-ProteinID:
XP_054773588
LinkDB
All DBs
Position
2:51499389..51535536
Genome browser
AA seq
1559 aa
AA seq
DB search
MHVMLGPFSIVNIRSSEPVSTLVPGCSKITDEFTFYKMMEQTYTILGVKLAFPCKAYPTQ
LSMMSMIIKGINRHQNCLLESPTGSGKSLALLCSSLGWQAGEREKQKKAAAEAYNKADYI
PSDEDYNADSFRKPCTCSCNKPTASTTDPGPSTSTASSSIVLRDDEKPSNISPPVESKGK
EEENAILISEDEDEKKDDDDDDFDFQPSKKRSRNSVGPMGTAKKTKHQKGVVFDDDFEDV
VEQSPNPHTKAHWQMKLVTPQAKAGASELSGSKNDTSPCSCSCHISKCQKMMEEEEKGMK
KEGDAPKPIKVPRIYFGTRTHKQIAQIIRELGRTAYKSVRMSILGSREHTCVHPEVSKSK
NKNEGCKELLDNKTGGTCKYFTNVHKMKQQWQIRDYGLTEAWDIEDLVNLGRRVKACPYF
SSRSLKDQADVIFCPYNYLIDPMIRESMEIDLKGQVVILDEAHNIEDSAREAASLTVTTE
QLQDAIDELDKLLSFKFREEHTRVIHSVGSSILRWINDFSTTLRQNDFDRASRMWTGQEM
VAALANMGISPGTLGTLQHHLAALTEDEDERGIKEMGPSLGAATGSLFKALFVIFNFLFK
DDMKFTKDYKVALLRTKAKNQFPNTNNRWIQRRRSNQAVWTLSLNFWCLNPAVAFTDFGN
AVRTIILTSGTLSPMSSFASELGVAFPIQLEANHVIKSSQVWVGSLAFGPNGHSLNATYK
NAETFAFQDDLGRVVLEVCKVIPYGVLCFVSSYSMMNKVIERWTATGLYDQLQSLKSVMC
EARGGDKSVFDEQLREFYETIKLCEEDGLENQRITGVLMFAVCRGKISEGMDFADNNARA
VITVGIPYPNVRDAQVEAKRHYNDQYAASRGLLSGGEWYEVQAYRALNQALGRCIRHKKD
WGAILLIDERFSRNPKKYISGISKWVRGKVNHHSQARDALTSLSEFANLRMQTSPDADTS
VFDGSQPNSQTLSPVTPSASSLNTSNLSHTPFRFGHQTSMPGTPECGQTNRMDNTSLPKQ
EKGMLFGRSNVGQLFIPMSKSAPTPTSNSMNDPTPLQHHIGQQGSMGSFVARGNGQCQTV
AEEDQEEQTKGRKTRRERKPKGKRAREKLDAAQKVPPQQTLLSFSPAVASNASIVVSKQQ
LGMSLINKTNGTPNVVIMNSGTCQNAQAESTSFVPVHSVQALPSVPIHSGGVIDLTSPVK
SLSNVDEVQRTHIPTPKAKLKFDDEPLPKVRDEATKTSFTSFKNKLSRFAFTKDENDNGC
QKEERNDKKCCRFKSSCGNVSNQETLVKGNFEEVQDDHTLKGDQRTTCVPTSDEEEEQCE
EDMRRKQREEDNGTPVLFDSEMGDSGSDAPGKPIPFSPQGTKAEPEESKKCTFSTEDISK
HNEITNESNNYYAADRTDDTNEMKTERDCDRSSRRLSIKGRRNLSRRKDHGEQNEAKEDV
NETTVQDTKPHMLVRRSARTRRTPKKVIDSVEKSKFCKDDIECAQCGIPLVRNLDGVTCL
LPEDVKNKYLSDVMATKERGQRSSCRCAVKGVEGSMLMTDASNLVHCNSITAENKSGKR
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcatgctggggccattcagcatcgtaaacatcagatcatctgagccagtatcc
actcttgtgccaggatgcagtaagataacggatgagtttacattttacaagatgatggaa
caaacatacaccatcctgggtgtgaagctagccttcccatgcaaggcatatcctacccag
ctttctatgatgtccatgattatcaaaggtattaatcgacatcagaactgccttcttgag
agtcctactgggagtggaaaaagtcttgcgcttctctgctcatcactcggatggcaggca
ggagaaagggagaaacagaaaaaggcagctgctgaagcatacaacaaggctgactacata
ccttccgatgaggattataatgccgacagttttaggaaaccttgtacctgtagctgcaac
aagcctacagcatccaccactgaccctggtccttcaacatccacggcttcttccagtatt
gtactacgggatgatgagaagccttccaacatatcacctcctgttgaatccaaaggaaaa
gaagaagaaaatgctattctcatatctgaggatgaggatgagaaaaaggatgatgatgat
gatgactttgactttcaaccctcaaaaaaacgttcacgaaattctgttggtccaatgggt
acggctaagaagacgaagcatcagaagggcgtagtctttgatgatgattttgaggatgtt
gtagagcagtctcctaatccccataccaaggctcactggcagatgaaactagtcacacct
caagctaaggcaggagccagtgaactatcgggatcaaagaatgacacgtcaccatgttcc
tgttcctgtcatatctctaaatgccagaagatgatggaggaggaggagaagggtatgaag
aaagaaggagacgcccctaaaccaataaaagtacctaggatctattttggtacaagaact
cacaagcagattgctcagattatacgagagctcggtcggactgcctacaagtcagtcaga
atgagtatcttgggaagcagagagcatacatgtgtccatcctgaagtctctaagagtaag
aacaagaatgaaggatgcaaggaactgcttgataacaaaacaggaggaacatgcaagtat
ttcactaacgtccacaagatgaaacaacaatggcagatccgtgactatggactgacagag
gcttgggatatagaagatttagtcaatctgggaagacgggtcaaggcttgtccatacttc
tcatccagatcacttaaggatcaagctgatgtgatcttctgtccatacaactacctcata
gatcctatgattagagaatcgatggagattgacctgaagggtcaggtggtcatcttggat
gaagcgcataacattgaagattctgctcgggaagctgccagtctcactgtcacaacagaa
caacttcaagatgccatcgatgagcttgacaaattattatccttcaagtttcgtgaagaa
cacaccagagttattcatagcgtgggttcaagtatcctgagatggatcaacgacttctcc
accaccctacggcagaatgactttgatagagcctcgaggatgtggaccggccaggagatg
gtcgctgcgctggccaacatgggaatctcacctggaacactgggtactctgcagcaccat
ctggcagcccttacggaagatgaggatgagagggggatcaaagagatgggaccgtccttg
ggcgctgctaccgggtcactcttcaaagctctctttgtcatctttaactttctcttcaag
gacgatatgaaattcaccaaagattacaaggttgcactgctgaggaccaaagccaagaac
cagtttccaaacacaaacaatagatggatccagagaagaagaagcaaccaggctgtgtgg
acattatcattgaacttctggtgcctgaacccagctgttgctttcacagactttgggaat
gcagttcggacaatcatcctgacttcgggaaccttatccccaatgagttcctttgcctca
gagcttggtgtggcttttcctatccagcttgaagcaaaccatgtcatcaaatcctctcag
gtgtgggtaggctctttagcctttggtcccaatggacactccttgaatgctacctacaaa
aatgcagagacatttgcattccaagatgacctcggtcgtgtggtgttagaggtctgtaag
gtgataccgtatggagttctgtgctttgtgtcttcgtacagtatgatgaacaaagtgata
gaaagatggacggcaacaggcttgtacgaccagctgcaatctttgaagtcagtgatgtgt
gaagccagaggaggtgataaatcagtctttgatgaacaactcagagagttctatgaaacc
atcaaactatgtgaggaagatggtttggagaaccagcgaatcacaggagtcctgatgttt
gctgtgtgcaggggaaagatcagtgaaggcatggactttgctgacaacaacgccagagca
gttatcactgttggcattccatacccaaatgttcgcgatgcacaggtcgaggctaagcgt
cattacaatgaccagtatgctgcctctagagggctcctatccggtggtgaatggtacgag
gttcaggcatacagggctcttaaccaagccttaggcagatgcattagacacaagaaagat
tggggagcaatcttgttgattgatgagcgttttagcaggaatccaaagaaatacatttct
ggcatttcaaagtgggtgcgaggcaaggtgaatcaccattctcaggctcgagatgctctc
acctctctttctgagtttgccaatctcaggatgcaaacttcacctgatgcagacacatct
gtatttgatggttcccagcccaactcgcagaccttaagtccagtcactccaagtgcctca
tcattgaacactagcaatctttcgcacacgccgtttcgctttggccatcaaaccagcatg
cctggtactccggaatgtggtcaaaccaacaggatggacaacactagccttcctaagcag
gagaagggtatgctttttggtcggagcaatgttggtcagctgttcattcctatgtccaag
agtgctccaacacccactagcaattctatgaatgaccctacaccattgcaacaccatatt
ggtcagcaaggatccatgggatcctttgtagcaagaggcaatgggcaatgtcagaccgtt
gcagaggaagaccaggaggaacagacaaagggtaggaagacaagaagagagagaaaacct
aaagggaaaagagcccgggagaaacttgatgctgcccagaaagtgccacctcagcagaca
ctcctgtcgttttcaccagcagtagcatcaaatgcaagcattgttgtttccaaacagcag
ctaggaatgtccctcatcaacaagaccaacggtacacccaatgttgtgatcatgaacagt
ggcacttgccaaaatgcccaagcagaatcaacaagttttgttcctgtacactcagtgcaa
gctttaccaagcgtcccaatccacagtggtggggttattgatctgacatcgcccgtgaag
agtttgtcaaatgtagatgaagtgcaaagaactcacataccaaccccaaaggctaaactt
aaatttgatgatgaaccactaccgaaagtccgggatgaagcaacaaagacatctttcaca
tcgtttaagaataaactctccaggttcgcctttaccaaggatgaaaatgacaatgggtgc
caaaaggaggaaaggaatgacaagaaatgttgcaggtttaaaagttcttgtggaaatgtt
tctaaccaggaaacattagtgaaaggaaactttgaagaagtacaagatgaccatactctc
aaaggagatcaaagaactacttgtgtacctactagtgatgaagaggaagaacaatgtgaa
gaggacatgaggagaaaacagcgggaggaagacaatggtactcctgtcctctttgattcc
gaaatgggagattctggaagtgacgcacctgggaaacctattcctttcagccctcaaggc
accaaggcagaacctgaagaatcaaagaagtgcacttttagtactgaggacatctctaaa
cacaatgaaattacaaatgagagtaataattactatgcagctgataggactgatgacaca
aatgaaatgaagactgagagggattgtgatagatcgtccaggaggttgtccatcaaggga
cgaaggaatctcagtcgtagaaaagatcatggtgagcagaatgaagccaaggaggatgta
aatgaaactactgttcaagacactaaacctcacatgttagtgcgtcggtctgccaggaca
aggagaacacctaagaaagtaattgattccgtcgagaaatcaaagttctgcaaagatgat
atagagtgtgcccagtgtggtataccattggttcgcaacttagatggtgtgacatgtcta
ctgcctgaggatgtcaagaataagtacttgtcagatgtcatggcaactaaagaaaggggt
cagaggtcatcttgtagatgtgcagtgaaaggagtggaaggatctatgttaatgactgat
gcaagcaatctggtgcattgtaattctatcactgcagagaataaatcaggtaagagataa
DBGET
integrated database retrieval system
