Lytechinus pictus (painted urchin): 129282044
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Entry
129282044 CDS
T09066
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129282044
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
129282044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
129282044
NCBI-ProteinID:
XP_054773954
LinkDB
All DBs
Position
18:364835..408412
Genome browser
AA seq
1996 aa
AA seq
DB search
MDFIYDWDDQGDQFSFEDSDRFEEDSLCSWVSEAESVCNNNWRGWKKNSNGTGGGDRLTS
AVPPATGISSSLTEVLFSFLVPSLVELTAKTTALHIPFEVVERVYPPVPENLQLRIAFWS
FPENEEDIRLYSCLANGSPDEFQRGEHMVRNKAVKDVLQIGFHLSGTVVPSHPMTQQHGT
SATFNVAITFDRRRISSCSCTCSSASKWCSHVVALCLYRIHHPSSVCLRAPVSESLSRLH
REQLQKFAQYLISEFPRLILPTAQRLLDELLLSQGSAINKVCGAPDPTAGPPATEMTHWF
LDEAILHENIKKTLIRFSGPSPIVFSDVNSLYLSSTAPQAAAEWTNLLRPLRGRMPEGIW
NLLSIVREMYRRRDSNAISLLRILTEECIICDQIVIWWFTTRTSALHSQHGNHGHRASSN
SSTAAAQHACASMCEEIVTLWRLAALNPINSRQDRGNHEQEFRKWHLQVIEKARKARGPS
HWVGAGGTGGNNNNLRKVDIEVFAGFKPAIEACMLDWSDFPIEGVTHRETRIPRVKVDQG
SDSNNQPSGSNHLVKTPESSMAGTPTCRSSPECSKQEVNVVVSSSLQVESPGSKEEKVKV
ESDSETLLRANSSDSSMSSSSDRVEGYQTGASLSHSDDTDSDVQTVSNFASKQSSDGKHL
QPHGAEIKDTGSQGSNSPREGVTAGDKPSGKRKTKSKHVDRGDSDLTDSEAGLVAEPIRR
EQESDSSNDARAGRKQALQVEQRESRESQPSSDEYQMYYYDTRQAKATEPTPPKKKNDTP
NPFVGIKKMEDRIEIMFSRAEALHAHGYTRHACKLAIQLAEEMLDKPPVLDAPPPTGLSN
RARKKHVHSQSVLTSMTLSKAAFLCSVLSEQSECHHLAFRMGMFGLELPRQPASTKALEV
KLNSQETDLVTLLKRIPLGPSELGMIRERAQKLQEGTLRSRGEALLPIMLASFIFDALCL
PGQPAANIPRTSVRLALVRERTPNDEKMGFEAAVGAMAMKANVSEADHPLLCEGTRRQRG
DLALAMLSHYKEDQGKFRQILDALLDKQGPKTHKTPCAAPNPINPVVSRPSQQIPTHGHG
HAHNHIHPQSHMPHPQTATGDDIAARIAQNMGELSMTGMPPGQPAGIKPQDVKRGKGGMK
DGHDSCEGGSDSNSRKDKKSKSRLEAPGPRPVSSGPPLTVSGNSNLDPAMCRIGQPNISQ
AGGGRNRGEFPTISGEDDGSHHPSTHGPPGASNHPSTTTGIGYWGRIFGRHPRKSKGMAS
IDSSAPETTSSDNSPTLARRVPPGGWGRYHGPGSDSGSSGNSSDSVSSSSSGERGSGARP
KLREAEPSPGQGIPVSLMRANPVSIPVAPENLNENKACIAAGKANRRGRKGGRNDNCPTV
PNQPSEASAHFFFELAKTVLNRAGGSSSTALFTQECTNSNHSGPHRGLHLCAFEIGLYAL
RLHNAVTPNWLSRTYSSHVSWITGQAMEIGSAAINLLVETWEGHLTPTEAASLADRASRG
RDPNMVRAAAQLALSCLSHAHALNPTDVNRALMQCKEQDIMMLQKACVAVESAAKGGDVY
PEVLFNVAKQWEWLHDNSTGQGNHSNQRHQHHHHHQQHQHDSDEDKSTAADEGTGEEIGP
VVPFVNAPVRGILPQQRVVGLPYGLAQPHAVPIVYHHPEYQEYVAVDPYMARHQFGNAAH
AMPVGDHRLQHRPPMPPDAHNMQWLPHHQYHGPCPYNANVAMPGMAVSVPRTAFQPTQVM
QLPPGQAMAQRPIIQYPMPPTIIHARPNVIQQQQHPVQPIPNMAQPIAPQQHPGLFYLHA
TYRVGMLGIDTLARRVHDERTQSRFSPNPPYGEDIKWLMEISKRLGVSYVQQFCACVLSV
VVSPFVLHTITWEAAHYLASMNHTSVQANLRSPILSPIVQKCVQMYIQCIHQRMYHITPP
EYDDFISVVQSAQKAFSMQAGGQAQFKDFIQSLRRLPRCKHDLWVRLSATLSPSLFEHSS
SSSASSPSTTTVSTNH
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atggattttatatatgactgggatgaccaaggagaccagttttcatttgaggatagcgat
aggtttgaggaagattcattatgttcttgggtgagtgaggcagagagtgtatgtaacaat
aactggagaggatggaagaaaaacagcaatggaacaggaggaggagacagattgacgtct
gctgtcccgccagccactggaatctcttcatcattaacagaagttctgttttcttttcta
gtcccctcattggttgagctgacagcgaagactaccgccctccacatcccgtttgaagtt
gtggaacgtgtctatccccctgttcctgaaaatcttcaactccgcattgctttctggagc
tttcctgagaatgaggaggatatcagactgtactcctgccttgctaatggaagccctgat
gagttccagaggggtgagcatatggtcaggaacaaagccgtcaaagatgttcttcaaatc
ggatttcacctgagtgggactgtagtaccatcccatcccatgacccaacagcacggtaca
agcgcaaccttcaacgtcgccatcacctttgaccgtagacgcatctcctcttgcagctgt
acatgcagttcggccagtaagtggtgtagtcacgtggtggcgctgtgtctctaccgaatc
catcatccatcgtccgtctgtcttcgcgctcctgtttcagaatccctgtccagacttcat
agagaacagcttcagaagtttgcccaatatctcatcagtgaattccctcgtttgatccta
cctaccgctcagcgactccttgatgagttgctattgtcacaaggtagtgctatcaacaag
gtttgtggtgctcctgatcctactgcaggaccaccagctacagagatgacacattggttc
ttagatgaagccatccttcatgagaacatcaagaaaaccttgatcaggttcagtggccct
tcacccattgttttcagtgatgtcaactctttatacctgtcctctacggcacctcaagca
gctgcagaatggactaacttgcttcgacccctgaggggacggatgcctgagggtatctgg
aacctgctatctattgtcagggaaatgtaccgtcgacgtgacagcaatgccatctcattg
cttcgtattttaacagaagaatgtatcatttgtgatcagattgtgatttggtggttcacc
acgcgtacctcagccctccactcacaacatggaaaccatggacaccgggcaagtagcaat
agcagtacagctgcagctcagcatgcatgcgctagtatgtgtgaagagatcgtcactctg
tggcgactagcagctctcaaccctatcaactcgcgccaagaccgcggcaatcacgagcaa
gaattccgcaagtggcatctgcaggtgatcgagaaggcaaggaaagctcggggaccatca
cattgggtgggggctggtggcacgggtgggaacaataataatcttcgtaaagttgacatt
gaggtctttgcagggttcaagcctgctattgaggcttgcatgttggactggagtgatttc
cccatagagggtgttacacacagagaaacacgcatccctcgagtaaaagttgatcaaggt
agtgattcgaacaatcaaccctcagggagcaaccacctagtcaaaacaccagaatcttcc
atggcgggaacaccaacatgccgatcgagtccagagtgtagcaagcaggaggttaatgta
gttgtaagtagtagtcttcaagtggaatcgccaggctctaaggaagagaaggtgaaggtt
gagtcagacagtgagactctcctgcgtgcgaactcctctgattcctcaatgtcttcatcg
agtgacagggtcgaaggttaccagactggtgcaagcctatcacactctgatgatacagac
tctgatgtgcagactgtctcaaactttgcttcaaagcagtcatcggatggcaaacattta
caacctcatggagccgaaatcaaagacactggtagtcagggttcaaactcacctcgtgag
ggcgtcactgctggggataaacccagcgggaagcgtaaaacaaagagcaagcatgttgat
agaggtgattctgatctaacagacagtgaagctggtcttgtagctgaaccgatcaggaga
gagcaggagagtgattcctctaatgatgcaagggccggtcggaagcaagcgcttcaagtt
gaacagagagagtcacgtgagtcgcaaccttctagtgatgaatatcagatgtattattac
gacaccagacaggccaaagcaacagaaccaaccccacctaagaagaagaatgatacacct
aacccatttgtgggtattaagaaaatggaagataggatagagatcatgttttcaagagca
gaagcgttacatgctcatggttataccaggcatgcatgtaaactggccattcagctagct
gaagagatgttagacaaaccacctgtgttagatgcacctcctcctactggtttatcaaat
agagcaaggaagaagcatgttcattctcagagtgttctaaccagtatgactttgtctaag
gcagcattcctctgtagcgttctctcagagcagtcagaatgtcatcaccttgcgttcagg
atgggaatgtttggcttggagttgccaaggcaaccagcatctaccaaagcactagaggta
aagctgaatagccaggagactgacttggttaccttgctgaagaggatacctctaggtcct
tctgagcttggtatgatccgtgagagagctcagaagctacaagaaggtaccctacgttcc
aggggagaggcattgcttcctataatgcttgctagctttatctttgatgcactttgctta
ccaggtcaaccagctgcaaacatacctcgcacatcagttcgtctggccctggtcagggag
cgtactcccaacgatgagaagatgggttttgaagcggccgttggtgctatggcaatgaaa
gctaatgtgagtgaagctgatcatcctctactgtgtgagggtacaagaagacagcgagga
gacttggctctagctatgctatcacattacaaggaagaccaaggaaaattcagacagatt
ttggatgcccttctagataagcaaggtccaaagacccacaagacaccatgtgctgctcct
aatcctattaatccagtggtatctagaccatctcagcaaatccccactcatggccatggc
catgcccataaccacatccacccacaaagtcacatgccccacccacaaacagccacaggg
gatgacatagctgcccgtatcgcacagaatatgggtgaactctctatgactggcatgcct
cctggacaacccgcaggaattaaacctcaagatgtaaagagaggtaaaggtggcatgaaa
gacggccatgatagctgtgagggcgggtctgacagcaacagccgcaaggataagaaatcc
aaatctagactagaggctccgggaccacgccctgtttcctctggaccacctctgacagtc
tccggcaactccaatcttgatcctgccatgtgtaggataggacaacctaatatcagtcag
gctggtggaggtaggaatagaggggaattccctactatcagtggggaggatgatggaagt
catcacccctctacccatggtccaccaggggcaagcaaccacccatcaactaccactggt
attggttactggggaaggatatttggaagacatcctaggaaaagtaaaggtatggctagt
atagacagtagtgcacccgagacaacctccagtgataactcccccaccctagcaagacga
gtacccccaggaggatggggacggtatcatggaccaggtagtgatagcggaagcagtggt
aattcaagtgattcagtcagttctagtagttcaggagagagaggatcaggtgcaaggccc
aagcttagggaggctgaaccaagtccagggcaaggcataccagtgtcactgatgcgtgct
aacccagtcagtataccggttgcaccagagaatcttaatgagaacaaggcttgtatagca
gcaggcaaagcaaacagaaggggtcgtaaaggaggtcgtaacgacaactgtccgaccgtt
ccgaaccagcccagcgaggcttcagcacacttcttctttgagttggcgaagaccgtgttg
aaccgagctggtggttcaagcagcacggcgctcttcacccaggagtgtacaaactctaat
cactccgggcctcacagaggtcttcatctctgtgcgtttgagattggattgtatgcattg
agacttcataatgctgttacacctaactggctttccaggacatattcatctcatgtttca
tggattacaggtcaagctatggagattgggagtgcagctatcaaccttctcgttgaaact
tgggaggggcatcttactcctacagaagctgcttcattggctgaccgtgcttccagaggg
cgtgatcctaacatggtacgagcagcagcccagctagctttgtcttgtctcagtcacgct
cacgctctcaatccaaccgatgtgaacagggcactcatgcagtgtaaggagcaggatatc
atgatgttacagaaggcatgtgtagctgtagaaagcgcagccaagggcggagatgtctac
ccagaagtactgttcaatgttgctaagcagtgggagtggcttcatgacaactctacagga
cagggtaaccatagcaaccaaagacatcagcatcatcaccaccatcagcagcatcagcac
gattcagatgaagacaaatcaaccgcagcagatgaaggtacaggagaggagattgggcct
gtggttccttttgtcaacgcacctgtgcggggtatcttaccacagcagcgggtggttggt
ctcccatatgggttggcacagcctcacgctgtaccaatagtctatcatcatccagaatac
caggagtatgttgctgttgatccttacatggcaagacatcagtttggtaatgcagctcat
gcgatgcccgtcggagatcacaggttacaacatcgacctccgatgcctccagatgctcac
aacatgcagtggcttccacatcaccaataccacggtccatgtccttacaacgccaacgta
gccatgccagggatggccgtgtctgtaccccgtacagccttccaacctacgcaggtcatg
cagcttcctccaggacaggccatggctcaaagacccatcatccaatacccaatgcctccc
actatcatccatgcacggcctaacgtgattcagcaacagcagcaccctgtgcagcctatc
cctaacatggcccaacctattgcccctcagcaacacccaggactgttttatcttcatgct
acttatagggttggtatgttaggtattgataccttggctaggagagtccatgatgagaga
acacagtctaggttctctcctaatcctccatatggtgaagatatcaagtggctcatggag
atctctaaaagattaggtgtaagttatgttcaacagttctgtgcatgtgtactaagtgtg
gtggtgagtccgtttgttctacatacaataacctgggaggccgctcattacctggcatct
atgaaccacacatccgttcaggctaatctaagatcccccatcttgagtcccatcgtacag
aagtgcgttcagatgtatatacagtgtatacatcagaggatgtatcatataacaccaccc
gagtatgatgattttattagtgttgttcagagtgctcagaaagctttctcaatgcaggct
ggtggacaggcacagtttaaagacttcattcagtcattacggaggttgcctagatgcaag
catgatttatgggttcggctgtcagctacgctctcaccaagcctctttgagcattcctct
tcctcttcggcttcctctccttccaccactactgtctcaaccaatcactga
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