Lytechinus pictus (painted urchin): 129282121
Help
Entry
129282121 CDS
T09066
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129282121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129282121
Spliceosome [BR:
lpic03041
]
Complex B
Other components
Prp19-related factors
129282121
Complex C
129282121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_YTH1
Nup35_RRM_2
zf-CCCH_4
RRM_3
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_3
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
129282121
NCBI-ProteinID:
XP_054774025
LinkDB
All DBs
Position
18:5960593..5967319
Genome browser
AA seq
334 aa
AA seq
DB search
MAVSKSANTYNRLNWEEADFPILCQTCLGDNPYVRMTKEKFGRECKICQRPFTIFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAALNVKDEMPKSDVNKEYYSQN
MERELANVEGNQALGAVGKAQAPSDLLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRFYGVDDPVADKLMRRAAAMPKLESPEDRMITTLYVGGLG
DKVTEEDLKGHFYQFGELRSINVVPKQQCAFVTFTNRLGAEAAAENSFQKLIIKGRRLNI
KWGKPQAQQGSGKKDEEGVKELNYEPVPGLPGGN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagcaaaagcgcaaacacctacaatcgactgaattgggaagaagctgatttc
cctattctgtgtcaaacatgccttggtgataacccatatgttcgcatgaccaaggagaag
ttcggacgagagtgtaagatatgtcagcgtcccttcaccatattccgttggtgccctggt
gctcggatgagattcaagaagacagaagtctgccaaacttgtagtaagctgaagaacgtc
tgtcagacctgcttgcttgatctagagtatggtttaccgattcaagtccgtgatgctgcc
ctcaatgtcaaagatgaaatgcccaagtctgatgtcaacaaggagtactactcacagaac
atggaaagagagttggccaatgtagagggtaaccaggcactaggtgcggtagggaaggcc
caagcccctagcgatcttcttctcaagttggctcggaccacaccctactacaagaggaat
aggcctcatatatgttccttctgggtcaagggagagtgtaagagaggagaagagtgccca
tacaggcatgagaagccaacagacccagacgaccccctggccgatcagaacatcaaggat
cgtttctatggagtggatgatcctgtcgctgataagctgatgagaagagcagcggccatg
cccaagctagagtcacctgaagataggatgatcactacgctctatgtcggtggacttgga
gacaaggtcacagaggaagatctcaagggtcacttctatcagtttggtgagctacgaagc
atcaacgtagtccccaagcagcagtgtgctttcgtcaccttcaccaacagactaggggcc
gaggcggctgcagagaactccttccagaagctcatcatcaaaggtcgaaggttaaacatc
aaatgggggaagccccaagcccagcaggggtcagggaagaaagatgaggaaggggtaaag
gaactgaactatgaaccagtaccgggactgcctggagggaactaa
DBGET
integrated database retrieval system
