Lytechinus pictus (painted urchin): 129282256
Help
Entry
129282256 CDS
T09066
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129282256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129282256
Spliceosome [BR:
lpic03041
]
Complex B
Other components
Prp19-related factors
129282256
Complex C
129282256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
RRM_occluded
zf-CCCH
RRM_YTH1
Nup35_RRM_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_10
RRM_3
RRM_PARP14_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
129282256
NCBI-ProteinID:
XP_054774162
LinkDB
All DBs
Position
18:5992074..6011012
Genome browser
AA seq
482 aa
AA seq
DB search
MAVSKSANTYNRLNWEEADFPILCQTCLGDNPYVRMTKEKFGRECKICQRPFTIFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAALNVKDEMPKSDVNKEYYSQN
MERELANVEGNQALGAVGKAQAPSDLLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRFYGVDDPVADKLMRRAAAMPKLESPEDRMITTLYVGGLG
DKVTEEDLKGHFYQFGELRSINVVPKQQCAFVTFTNRLGAEAAAENSFQKLIIKGRRLNI
KWGKPQAQQGSGKKDEEGVKELNYEPVPGLPGVLPHPPQMNQGQGNAPFPPPMLPPPPMN
NPPHPHPQFRPPPGYGMGMPPPPRLPPPPHHMPPGNRARFPPPPPGGPPPRMPRFPPPPP
FGGRRDGPMPPHMRHRMPLPPPPNVPPPPRSQQGSAKPPAVHYPSQDPQRMGTGVEETST
KS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagcaaaagcgcaaacacctacaatcgactgaattgggaagaagctgatttc
cctattctgtgtcaaacatgccttggggataacccatatgttcgcatgaccaaggagaag
tttggacgagagtgtaagatatgtcagcgtcccttcaccatattccgttggtgccctggt
gctcggatgagattcaagaagacagaagtctgccaaacttgtagtaagctgaagaacgtc
tgtcagacctgcctgcttgatctagagtatggtttaccgattcaagtccgtgatgctgcc
ctcaatgtcaaagatgaaatgcccaagtctgatgtcaacaaggagtactactcacagaac
atggaaagagagttggccaatgtagagggtaaccaggcactaggtgcggtagggaaggcc
caagcccctagcgatcttcttctcaagttggctcggaccacaccctactacaagaggaat
aggcctcatatatgttccttctgggtcaagggagaatgtaagagaggagaagagtgccca
tacaggcatgagaagccaacagacccagacgaccccctggccgatcagaacatcaaagat
cgtttctatggagtggatgatcctgtcgctgataagctaatgagacgagcagcggccatg
cccaagctagagtcacctgaagataggatgatcactacgctctatgtcggtggacttgga
gacaaggtcacagaggaagatcttaagggtcacttctatcagtttggtgagctacgaagc
atcaacgtagtccccaagcagcagtgtgctttcgtcaccttcaccaacagactaggggcc
gaggcggctgcagagaactccttccagaagctcatcatcaaaggtcgaaggttaaacatc
aaatgggggaagccccaagcccagcaggggtcagggaagaaagatgaggaaggggtgaag
gaactgaactatgaaccggtaccgggactgcctggagtattaccacatccaccccaaatg
aaccaaggccaaggcaacgcaccattccctcccccgatgcttcctccccctccaatgaac
aaccctccccatccccacccccagttccgaccccctcccggctacggcatgggtatgccc
ccacccccacggttaccccctccccctcaccacatgcccccaggcaacagggcaaggttc
ccccctccccctccaggtgggcctcccccaaggatgcccaggttccctccaccccctccc
ttcgggggcaggagggatggtcccatgccaccgcatatgcgacacagaatgcccctgccc
cctccccccaatgtgcccccgcccccaaggtcacagcagggtagtgcgaagcctccagcg
gtacattacccctcacaggatccacagaggatggggacgggtgtcgaggaaacgtcaaca
aaatcttag
DBGET
integrated database retrieval system
