Lytechinus pictus (painted urchin): 129282274
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Entry
129282274 CDS
T09066
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129282274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129282274
Enzymes [BR:
lpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129282274
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
129282274
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
129282274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
NTP_transf_2
COG4_N
Motif
Other DBs
NCBI-GeneID:
129282274
NCBI-ProteinID:
XP_054774177
LinkDB
All DBs
Position
18:complement(6918203..6927517)
Genome browser
AA seq
339 aa
AA seq
DB search
MSKRKAPDSNNPNQEFVDFLVELANYEKNVNRAMHKHNAYRKAASVLAKYPTKIKSGDEA
KKLGGIGDKIAKKIDEVIATGKLEKLEKIRKDDKSEAINLLTRVSGIGPVAARKLVMDDG
IMSIDDLRKHTDKLNHHQKIGLQHFEDFERRIPREEVTRLETLVKSQVAAEDEDYLATVC
GSYRRGAASSGDMDVLLTHPSYTSKDKKKPELLVKVVKKMIDSKLVTETISQGDTKFMGI
IRLPQKDAKEGEERYFRRLDIRLIPHDQYHCGTLYFTGSDMFNKDMRAKAIDEGFTLNEY
SIRPMGSTGIAGEPLPVTSEEDVFDYIGMKYKSPSERNM
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagaaaagcaccagatagcaacaatcctaaccaggaatttgtcgactttctt
gtcgagcttgccaactatgagaagaatgtcaatcgagcaatgcacaaacacaatgcttat
cgcaaggctgccagtgtcctggctaagtacccaacaaagatcaagagcggagatgaggca
aaaaaactgggtggcattggtgataaaattgccaaaaagattgatgaagtcatagcaaca
ggaaagcttgagaaactggagaaaattcgcaaagatgacaaaagtgaagctatcaatctg
ctcaccagagtgtcaggaatagggcccgttgctgccagaaaactggtaatggatgatggc
ataatgtctattgatgatctgagaaagcacacagataagctaaatcatcatcaaaagatt
gggttacagcattttgaagactttgagaggagaatccctcgtgaagaggtgactagattg
gaaactctcgtcaagtctcaggtagcagcggaagatgaagactacttagcaacggtgtgt
ggaagctacaggagaggggctgcctccagtggtgatatggacgtccttcttacacaccca
tcatacacatccaaggataagaagaagcctgagctgttggtgaaagtggtgaagaaaatg
atagacagcaaactagtgacagaaaccatatcacagggtgacaccaagtttatgggtatc
atccgtctcccccagaaggacgccaaggagggtgaagagagatacttccgtcgtcttgac
atccgtctgataccccatgatcagtaccactgtggaactctatacttcaccggaagtgat
atgttcaacaaagacatgcgagcgaaggcgatagatgaaggtttcaccctcaatgagtac
tctatcaggccaatgggtagtacaggaattgctggtgaaccacttcctgtgacctctgaa
gaggacgtctttgactacatcgggatgaaatataaatctccttcagaaagaaatatgtaa
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