Lytechinus pictus (painted urchin): 129283155
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Entry
129283155 CDS
T09066
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129283155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129283155
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129283155
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Cullin_binding
Motif
Other DBs
NCBI-GeneID:
129283155
NCBI-ProteinID:
XP_054774966
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All DBs
Position
19:31601769..31626545
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AA seq
499 aa
AA seq
DB search
MSGDIRSELFTGWGYVPEKVKKAQRKIQVYPCDTDAWNILLREAQNQPVEKARTLYELVV
TTFANSGRYWKNYVEQEMRGKNYERVEKLFQRCLMKVLNIDLWKCYLAYVKETKGSLSSY
REKMAQAYDFALDKMGMDIFSFPIWNDYINFLKGVEAVGSYAENQRITAVRRVFQRGIVN
PMSNIEALWKDYNNYENGINVMIAKKMIEDRSRDYMNARRVAKEYEAITKGLNRNNPSVP
PTGTAEEARQIELWKKYVNWEKQNPLRTEDQMLITKRVMFAFEQCLLCLGHHPDVWYEFA
LYLESASRIFTEKGDMNSGKVYSDEAAAVYERAISTFMKKNYLIYFAYADFEEGRMKYEK
VHNIYSRMLAQEDVDPTLVYVQYMKFARRAEGIKAARTVFKKAREDPRSKYHVFVAAALM
EYYCSKDSQVAFKIFELGLKKYGNVPEYILAYVDYLSHLNEDNNTRVLFERVLTSGSLPQ
EQSGEIWLRFEDFESTSEI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggacataagatcggagctgtttacgggctggggatatgtgccagaaaaagtg
aagaaagcccagcggaaaatccaagtttatccgtgtgacaccgacgcatggaatattctt
ttacgagaagcccagaaccaaccagtggagaaagccaggaccctatatgagcttgtggtt
acgacgtttgccaactctggacgctactggaagaactatgtggagcaagagatgagagga
aagaactacgaaagagttgaaaagctgtttcaacgatgcttgatgaaagtgctgaacatt
gatctgtggaagtgctacctggcctatgtcaaggagactaaggggagtctatcatcctat
agagagaagatggcccaggcgtacgactttgccttggataagatggggatggatatcttt
tcttttcccatctggaatgactatatcaacttcttgaagggagttgaagctgtaggttcg
tatgcagagaaccagaggattactgctgtacgacgtgtattccaacgaggtatcgtcaac
cccatgtcaaatattgaggctctctggaaagactacaacaattatgaaaacggtatcaat
gtgatgatagcaaaaaagatgattgaagatagaagcagagattacatgaatgccaggaga
gttgccaaggagtatgaagctatcacaaagggtctcaatcggaacaacccatccgttcct
ccaaccggtacagcggaagaggcgaggcaaatagaactctggaagaaatatgtaaattgg
gagaaacagaatccacttaggacagaggatcagatgctcattacaaagagagtaatgttt
gcctttgagcagtgtctcctgtgtcttggacatcatcctgatgtatggtatgagtttgct
ctctatttggaaagtgctagtaggatattcacagagaaaggggacatgaacagtggaaag
gtgtacagtgatgaagcagctgcagtctacgaaagagccatctcaacatttatgaagaaa
aactacctgatatactttgcttatgccgactttgaagaggggaggatgaagtacgagaag
gttcataatatctactcaaggatgttagcgcaggaagacgtggacccaacactggtatac
gtgcagtatatgaagtttgccagacgagcggagggcatcaaggcagcaaggacagtattc
aagaaagctagagaggatccaaggagcaagtatcatgtctttgtggctgcagctctcatg
gaatactactgtagcaaggactcacaagtagcttttaagatctttgagttgggtctgaag
aagtatggcaatgttccagagtacatcctagcctatgtagactacctttcacatctcaat
gaggataataatacaagggttctgtttgagagagttcttacatccggaagccttcctcaa
gagcagtctggagagatctggttacgatttgaagattttgagtcgacatcggagatctag
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