Lytechinus pictus (painted urchin): 129284280
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Entry
129284280 CDS
T09066
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129284280
03036 Chromosome and associated proteins [BR:
lpic03036
]
129284280
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129284280
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
129284280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
Tex_central_region
SPT6_acidic
Tex_N
S1
HHH_3
HHH_9
Spt6_S1
Tex_YqgF
SH2
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
129284280
NCBI-ProteinID:
XP_054775680
LinkDB
All DBs
Position
2:71469838..71515219
Genome browser
AA seq
2109 aa
AA seq
DB search
MADFFEEEAEVSDEDAPASSDEEEEEYEEDIDEGANVPDLINDDEEVENDSEGEEIGRKK
KRKHRADYDERLEEEDYDLIEENLGVKVERKKFRRVRQISEEDDSGSEDGGAGTSRELDD
RDAIAKEIFAGEEEEGELSPGEAEDLEEQHEVDQGEQYGALEESEEESDPDDFIVDDSGQ
PIGKKKKKGHKHRYTDSALQEAQDIFGLDFDFDEFEGYGDEYEEAEEEEYSEYEDEEEEL
EEGGEQRRRQKRPGKKRAPKKSIYEVFEPSELERGHFTDLDNEIKTADIPERFMLRTVPV
TEAADEELEKEAEWIYKQAFLTPSVSNQEFGDQGDGYGGSSGYERKPPKTKKKIREALLF
MRNQHFEVPFIAFYRKEYVEPELNFNDLYKVYHWDAKWCQLKARKANLLKLFEKMQTYQF
DTVMKDKDFDAELPEDFRALSTQDIERIVHFLEYEDEEEELEEGGEQRRRQKRPGKKRAP
KKSIYEVFEPSELERGHFTDLDNEIKTADIPERFMLRTVPVTEAADEELEKEAEWIYKQA
FLTPSVSNQEFGDQGDGYGGSSGYERKPPKTKKKIREALLFMRNQHFEVPFIAFYRKEYV
EPELNFNDLYKVYHWDAKWCQLKARKANLLKLFEKMQTYQFDTVMKDKDFDAALPEDFRA
LSNQDIERLNAVDSTESLKDVYMHFLLYYGRELPKMHNSLKAKPKEKKMKMVTVKRKVMV
KRWRKKKKEKSPHKERRIEDDDSSDEEDSNKKMDATEEKEKEDEEKMDTEDGEKGDEEGG
EEKKKKDEEEDDGFEDGETKDKEEGEEGETKKDKEDGEVAEEEEMEEVEVETEVEEEMEV
EASDDEDDEEGVVTSYEIKQASRKSMYALCQDAKLTGLAAKFGLTPEQFGENLRDNYQRH
DPEQHQASPLEAASEYLSNKFKDEEGVLKAARYMVALQIAHDPLVRQCVRQTYYERAKIS
VKPTKKGIKEIDESHPIFGSKYLKNKQVKDLLGDQYLKLVQAEKDKLITMTMSLDMAQAS
STSYTSATYFEEMKQLYYLDEFRSEVQAWNKERSGALEMALKSILYPQLAKELKTKLIAE
AKEGIIKQCCTKMFNYLKVMPLQVDQPMEEDEDDFLDGNSRMGLRVMGFAFTSAMDSAAF
CCMLDGEGEVTDFLRLPHFLRRRNAFWQRDRDLKEADVESLKTFISNQKPHVIAVASEGR
NTTSVLQDIRGCIEDLESEQQMAPIKVQLLDSNVAVVYQASKLVETEFRDYPPLLRQAVS
ISRRLQDPLIEFSRLCNPDDDLLCLKLHPQQEAVSQDELKEALYQEFIYRVNEVGVDINR
AILHPHTVSLVQFICGLGPRKGNALVRTLKQKNQRLDNRNQLVTHCQLGPKVFINCAGFL
KIDTASAGDGADDTYIEVLDSTRIHPETYEWARKMAVDALEYDEAADDANPAEALEEILE
NPDKLKDLDLDAFAEELERQGYGNRSITLYDIRAELNSRYKDLRTPFHPFTPEEAFSTLT
KETPETFYRGKMVTCVVTGIARRRPTREMLDDANPSKNDETGLWLCPFCQQDNFFELNEV
WSHFDTGNCPGQAVGVKVRLDNGIMGFIHTKFLSDSKVKNPEDRVKIGMTLHARIMKIDI
ERFQVDLTSRSSDLQDRNGEWAPPRDTYYDYESAEMDKQKDEDEKKKAAASSTYVKRVIV
HPSFQNITYKQAEKVMRESDVGDVIIRPSSKGADHLTVTWKVDDGIYQHIDVQEEGKDND
FSLGSTLKIGEEGFEDLDEIIARHIQPMAAFVRDVTSHKYYRDVEGGSKELMDKCLAAEK
KKAPSRIPYFMCFCKEYPGKFLLSYQPRSKGRHEYVTITPDGYKFRGQMFTTINSLHRWF
KVHFRDPIPGMNVTPTPMSTHRTPMSVAHDGTPWQTGTPMIQKTGTTFTGGMYATPSVLQ
GTPRQTPGRQTPLTGTAAGRYGYGYPYTTPQNITTPVGATPSYQGMRTPQGGVARTPQVN
RTPQINPARTPSVAGMTPQGTPQYQSRTTPRQSWGGSTPTQQQVPHRSAGRTPQRSSGSS
SSREVPRTGGPVDWAQQAALWAKQRQQNLRSPAVQPSPALHEPSPMSISNTPAPSQGGGD
STPLIDEEI
NT seq
6330 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttctttgaggaagaagcagaagtatcagatgaagatgctccagcaagcagt
gatgaggaagaggaagaatatgaagaagatattgatgaaggggctaatgttcctgatctg
atcaacgatgatgaagaagtagaaaatgattctgagggagaagagattggtagaaagaaa
aaaagaaaacacagagcagattatgacgaaaggctggaagaggaagattatgatctgatt
gaagagaacttgggagtcaaagttgagaggaaaaagtttcgtagagtgcgtcagatctcc
gaggaggatgatagtggaagtgaggatggaggagcaggaacatcaagggagttagatgac
agggatgctattgccaaggagatctttgcaggcgaggaagaagagggcgaacttagtcct
ggagaagctgaggatctagaggaacagcatgaagtggaccaaggggagcagtatggagcc
cttgaagagtctgaagaagaatcagacccagatgatttcattgtcgatgatagtgggcaa
cctattgggaagaaaaagaagaaaggacataaacacagatacacagactctgcattacaa
gaagcacaggatatctttggacttgattttgattttgatgaatttgaaggttacggtgat
gaatatgaagaagcagaagaggaggaatattctgagtacgaggatgaggaagaggaattg
gaagaaggcggagaacagaggagaagacagaagagacctggcaagaaacgagctccaaag
aagagtatctatgaggtttttgagccaagtgagttggagagaggtcatttcacagatctt
gataatgagatcaagacagcagacattccagagagatttatgttgagaacggttcctgtg
actgaggcagctgatgaagagcttgagaaagaagctgaatggatctacaaacaagccttc
ctaacaccatcagtatcaaatcaggaatttggtgatcaaggtgatggttatggtggatca
agtggttatgaaaggaaacctccaaagacaaagaagaaaatcagggaagccctcttgttt
atgaggaatcaacactttgaggtaccatttatagctttctacaggaaggaatatgtagag
ccagagctgaatttcaatgatctctataaagtctatcattgggatgcaaagtggtgtcaa
ttaaaagcaaggaaagccaatctcctgaagttatttgagaagatgcagacttaccagttt
gatacagtaatgaaggataaagactttgatgcagaactccctgaagatttcagagctctt
tccacccaagatattgaaagaatagtgcatttcttagagtacgaggatgaggaagaggaa
ttggaagaaggcggagaacagaggagaagacagaagagacctggcaagaaacgagctcca
aagaagagtatctatgaggtttttgagccaagtgagttggagagaggtcatttcacggat
cttgataatgagatcaagacagcagacattccagagagatttatgttgagaacggttcct
gtgactgaggcagctgatgaagagcttgagaaagaagctgaatggatctacaaacaagcc
ttcctaacaccatcagtatcaaatcaggaatttggtgaccaaggtgatggttatggtgga
tcaagtggttatgaaaggaaacctccaaaaacgaagaagaaaatcagagaagccctcctg
tttatgaggaatcaacactttgaggtaccatttatagctttctacaggaaggaatatgta
gagccagagctgaatttcaatgatctctataaggtgtatcattgggatgcaaagtggtgt
caattgaaagcaaggaaagccaatctcctgaagttatttgagaagatgcagacttaccag
tttgatacagtaatgaaggataaagactttgatgcagcactccctgaagatttcagagct
ctttccaaccaagatattgaaaggctgaatgctgttgattctacagaaagcctgaaggat
gtctacatgcacttcttgctatactacggccgagagctccctaagatgcacaattcactt
aaagccaaacccaaagagaagaaaatgaagatggtgacggtcaagaggaaagtgatggtc
aaacgatggaggaagaaaaagaaggaaaaatcccctcacaaagaacgaaggatagaagat
gatgatagtagtgatgaggaggatagtaacaagaagatggatgcaacggaggagaaggag
aaagaggatgaggagaagatggacacagaggacggggagaagggagatgaggaaggtggg
gaggagaagaagaaaaaagatgaggaggaggatgatggttttgaggatggtgagacaaaa
gataaggaagaaggggaggaaggagagacgaagaaggataaagaagatggagaggtagct
gaggaggaagaaatggaggaggtggaggtggagacagaggttgaagaggagatggaggtg
gaggcttctgatgatgaggatgatgaagaaggcgtggtaactagctatgagatcaaacaa
gccagcaggaaatcaatgtatgcactctgccaagatgctaaactcactggtctggctgcc
aagtttggattgactcctgaacagtttggtgagaacctgagagataattaccagaggcat
gaccctgaacaacaccaggctagtcccttagaggctgcatcagagtacctttcaaataaa
ttcaaggatgaggaaggtgttctgaaggcagcaaggtacatggtagcccttcagatagca
catgaccctctggtcagacagtgtgttagacagacatattatgagagagccaagatatca
gtcaaacctaccaagaaggggatcaaggaaattgatgagagtcatcccatctttggaagc
aaatacctgaagaataaacaagtgaaggatctattaggagatcaatacctgaagctagta
caggcagagaaagacaaactcatcacgatgaccatgtctcttgatatggcacaggcatca
agtacatcctacacatcagccacttactttgaggagatgaagcagttgtactacctagat
gagttccgttctgaggtacaggcctggaacaaagaaaggagtggtgccctcgagatggcc
cttaagagtatcctctaccctcaacttgccaaagaactcaagacaaagcttattgctgaa
gccaaagaaggtataatcaagcaatgctgcacaaagatgttcaattacctgaaggtgatg
ccattacaagtagatcaacccatggaagaagatgaagatgatttcttggatggaaacagt
cggatgggattaagggttatgggattcgccttcacaagtgcaatggacagtgcagcattc
tgttgtatgcttgacggcgagggagaagtgacagacttccttcgattgcctcactttttg
agacgaaggaatgccttctggcagcgagatcgtgacctcaaggaagctgacgtagaatca
ctgaaaacattcatctcaaatcagaaacctcatgttatagctgtagcctcggaaggaagg
aacacaacatctgtgttgcaagacatcaggggatgcatcgaggatctggagtcggaacaa
cagatggcgccaatcaaagttcaattgctcgacagcaatgtggctgttgtataccaggct
tccaagctagttgagacggaattccgtgactacccaccgttgctacgtcaggcagtgtca
atatcacgtaggttacaggatccgctgattgagttctctcgattatgtaatccagacgat
gatctcctctgcttgaaacttcatcctcaacaggaagccgtgagccaagatgaactgaag
gaggctctctaccaagagttcatctacagggtcaacgaggtgggcgtcgacatcaacagg
gctatcttacatcctcacacagtctctctcgttcagtttatatgtgggctgggtcccagg
aaaggcaatgctttagtcaggacactgaagcagaagaaccagcgtttagacaatcgtaat
caactagtaacccactgtcagctcggtcctaaggtcttcatcaactgtgctggattcctg
aagatagacactgcttcagctggtgatggtgctgatgatacatacattgaagtccttgat
agcacccgtatccaccctgagacatatgaatgggccagaaagatggctgtagatgcctta
gagtatgatgaagctgctgatgatgcaaaccctgctgaagcactagaagagattctagag
aaccctgataaactcaaggatctggatctggatgcctttgcagaggaacttgaaagacag
ggttatggtaataggagtatcacattgtatgatatcagagctgaactgaacagccgttac
aaggatcttaggacgcctttccatccattcacccctgaagaagccttcagtacactgaca
aaggaaacaccagaaacattctatagaggtaaaatggtaacatgtgtagtgactggtata
gcaaggaggagacccaccagggagatgttagatgatgctaatcctagtaagaatgatgag
acaggattatggctatgtcccttctgtcaacaagataacttctttgaactcaacgaggta
tggagccactttgacacaggtaactgcccaggtcaggcagtaggggtcaaagttcgtctg
gacaatggcatcatgggatttattcacaccaagttcttgagtgacagcaaggtcaagaat
cctgaagacagggtcaagattggtatgaccctccacgctcgcatcatgaagattgacatt
gagaggtttcaggtggatctgacgagtaggagctccgatctccaggatcgtaacggagaa
tgggcaccacctcgtgatacttactatgactatgaatcagctgagatggataaacaaaag
gatgaagatgagaagaagaaggccgcagcatccagcacatatgtgaagagggttatcgtg
catccatccttccaaaatatcacctacaagcaagctgagaaagtgatgagagaatcagat
gtaggcgatgtcatcattagaccaagtagtaagggagctgatcacttaactgttacatgg
aaagtagatgatggtatttatcagcatattgatgtacaagaagaaggcaaagataatgat
ttcagtctgggatcaacattaaagattggagaagagggatttgaggacttggatgaaatc
atagcccgtcacatccagccgatggcagcctttgtacgagacgtcacctctcataaatac
taccgagatgtagaagggggtagcaaggaacttatggacaagtgtctcgctgctgagaag
aagaaggcaccaagtcgtatcccatatttcatgtgtttctgtaaagaatatccaggcaag
ttcctgttgtcataccagccacgtagtaaaggaagacatgagtatgtcacaattacacct
gatgggtataagttcagaggtcagatgttcacaaccatcaactctttacatcgctggttc
aaggttcattttagagatccaatacctggtatgaatgtgactccaacaccgatgagtact
cataggacacctatgtctgtggcccatgatggcacaccttggcaaacgggcacacctatg
atccaaaagactggtacaacattcacagggggtatgtatgccacgcccagtgtgcttcaa
ggtacccctcgacagactccaggccgtcagacacccttgactggtacagcagcaggtcgc
tatgggtatggctacccctacactaccccacagaatattactacacctgttggtgccact
ccttcttaccagggaatgcgcacccctcagggaggtgtagcccgcaccccacaggtaaac
aggaccccccagatcaaccccgcccgtaccccatctgtggcaggcatgacaccccagggc
acaccccagtaccaatcacgcaccactcctcgccagtcatggggtgggagtactcctaca
caacaacaggttccacacaggagtgctggaagaacaccacagaggagtagtggtagcagc
agtagccgtgaagtgccacgtactggaggcccagtggactgggcccagcaagctgccctt
tgggccaaacaacgccaacagaacctgcgaagcccagccgtccaacctagccctgcccta
catgaacctagcccaatgtccatctcaaacacccctgcacccagccagggaggaggggat
tcaacgcccctcattgatgaagagatttga
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integrated database retrieval system
