Limnochorda pilosa: LIP_0012
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Entry
LIP_0012 CDS
T04150
Name
(GenBank) tryptophan synthase subunit beta
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil00260
Glycine, serine and threonine metabolism
lpil00400
Phenylalanine, tyrosine and tryptophan biosynthesis
lpil01100
Metabolic pathways
lpil01110
Biosynthesis of secondary metabolites
lpil01230
Biosynthesis of amino acids
Module
lpil_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LIP_0012
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
LIP_0012
Enzymes [BR:
lpil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
LIP_0012
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GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
BAS25872
UniProt:
A0A0K2SFR3
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Position
13898..15265
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AA seq
455 aa
AA seq
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MSDVRTKILLDESHLPTHWYNILADLPNPPKPPLNPRTGEPVSPDDLAAIFPMALIEQEV
STERWIPIPEPVRDIYRLWRPTPLYRAHRLEAALGTPARIYYKYEGVSPAGSHKPNTAVA
QAFYNKQAGIRRLATETGAGQWGSALSLACNLFGLECTVYMVKVSYHQKPYRRSMMETWG
ATVHASPSDRTQAGRAVLKADPESPGSLGIAISEAVEDAATHDDTNYALGSVLNHVLLHQ
TVIGLEAKEQLASVGEKADVVIAPCGGGSNLGGIAFPFLADRFQGEEVQVLAVEPSACPT
LTRGQYAYDYGDVAGLTPLLPMYTLGRSFVPPGIHAGGLRYHGDSALVSQLYHEGHIQAR
AYPQGPVFEAAILFARHEGIVPAPESAHAVRAAVDEALACKERGEARTLLLNLSGHGHFD
MGAYDAYLAGRLEDLEYPQEAIDRALEDLPQAPAI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgttcgcaccaagatccttctggacgagtcgcacctgccgacgcactggtac
aacatcctcgccgacctccccaacccgccgaagccgcccctgaacccccggacgggcgag
cccgtgagcccggacgacctggcagccatcttccccatggcgctcatcgagcaggaggtc
agcaccgagcgctggatccccatccccgaacccgtccgcgacatctaccggctctggcgg
cccacgcctctctaccgggcccatcggttggaggcggccctgggcacacccgcccgcatc
tactacaagtacgaaggggtctcgccggcggggtcccacaagcccaacacggctgtggcg
caggccttctacaacaagcaggcgggcatccggcgcctcgccaccgaaacgggcgccggc
cagtggggcagcgccctgagcctggcctgcaacctcttcggcctcgagtgcaccgtctac
atggtgaaggtgagctaccaccagaaaccgtaccggcgctccatgatggaaacctgggga
gccaccgtccatgcgagccccagcgaccggacccaggcgggccgagcggtgttgaaggcc
gaccccgagtcgcccggaagcctgggcatcgccatcagcgaggcggtggaggacgcggcc
acccacgacgataccaactacgccctggggagcgtcctcaaccacgtgcttctgcaccag
acggtcatcggcctcgaggcgaaggagcagctggcatcggtgggcgagaaggccgacgtg
gtcatcgccccctgcggcgggggaagcaatctggggggcatcgccttccccttcctggcc
gaccgcttccagggcgaggaggtgcaggtactggcggtggagccctcggcctgccccacc
ctcacccgcggccagtacgcgtacgactacggcgacgtggccggcctcacgccactcctg
cccatgtacaccctgggccggagcttcgtcccgccggggatccacgccggaggtctgcgc
taccatggggactcggcgctggtgagccagctgtaccacgagggccacatccaggctcgg
gcctacccccagggtccggtcttcgaggccgcgatccttttcgcccggcatgaggggatc
gtgccggccccggaatcggcccacgccgtgcgggcggccgtggacgaggcgctggcgtgc
aaagagcggggcgaggcccggactctgctgctcaacctctccgggcacggccacttcgac
atgggcgcctacgacgcctacctggccggacgcctggaggacctcgagtacccccaggag
gccatcgaccgggccctggaggacctcccgcaggctccggcgatctga
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