Limnochorda pilosa: LIP_0015
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Entry
LIP_0015 CDS
T04150
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil00260
Glycine, serine and threonine metabolism
lpil00460
Cyanoamino acid metabolism
lpil00630
Glyoxylate and dicarboxylate metabolism
lpil00670
One carbon pool by folate
lpil00680
Methane metabolism
lpil01100
Metabolic pathways
lpil01110
Biosynthesis of secondary metabolites
lpil01120
Microbial metabolism in diverse environments
lpil01200
Carbon metabolism
lpil01230
Biosynthesis of amino acids
lpil01240
Biosynthesis of cofactors
lpil04981
Folate transport and metabolism
Module
lpil_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LIP_0015
09102 Energy metabolism
00680 Methane metabolism
LIP_0015
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LIP_0015
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LIP_0015
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LIP_0015
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LIP_0015
Enzymes [BR:
lpil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LIP_0015
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAS25875
UniProt:
A0A0K2SFL2
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All DBs
Position
17503..18786
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AA seq
427 aa
AA seq
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MAIPTGSKYQTEELELIRRVDPEVAEAIAAEVRRQQQTLELIASENFASRAVMAAQGLVM
TNKYAEGYPARRYYGGCQFVDVPERLAIQRAKELFGAEHANVQPHSGAQANQAVYFAALE
PGDTIMGMALPHGGHLTHGSPVNLSGRWFRVVPYHVSRETEELDYDEVRALALENRPKLI
VAGASAYPRIIDFERLASIAREVGARLMVDMAHIAGLVAAGVHPSPVPHAEYVTTTTHKT
LRGPRGGLILTTAERAAELDKAVFPGVQGGPLMHVIAAKAVALREALTPEFRVYQEQIVR
NARALASALQDRGWRLVSGGTDTHLMLVDVKSRGVTGKEAEARLEAVGITVNKNTIPFDT
EKPFVASGIRIGTPAVTTRGMKEPEMELIAGLIDTVLSGSPGEAALQEVAAQVRELTAAF
PLYPGLP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtggcgatccccacggggagtaagtaccagaccgaggagctggagctgattcgccgggtc
gatccggaggtggcggaagccatcgccgccgaggtgcgacgccagcagcagaccttggag
ctgatcgcctctgagaacttcgcgagccgggccgtcatggccgcccagggcttggtgatg
accaacaagtacgcggaaggctacccggcgcgccgctactacggcggctgccagttcgtg
gacgtgcctgagcggttggccatccagcgggcgaaggagctcttcggtgccgaacacgcc
aacgttcagccccactcgggggcccaggccaaccaggccgtctacttcgccgccctggag
ccgggcgacaccatcatgggcatggcgctcccccatggcggacacctgacccacgggagc
cccgtgaacctctcggggcgctggttccgggtggtgccgtaccacgtttcccgggaaacg
gaagagctggactacgacgaggtgcgcgccctggccctggagaaccggcccaagctgatc
gtggccggggccagcgcctacccgcggatcattgatttcgagcgcctggcctccatcgcc
cgggaggtgggcgcccggctgatggtggacatggcccacattgccgggttggtggccgcc
ggcgtccatcccagccccgtgccccacgcggagtacgtcaccaccaccacccacaagacc
ctgcgcggccctcgcggcgggttgatcctcaccaccgccgaacgggccgcggagctggac
aaggccgtcttccccggcgtccagggcgggccgctcatgcacgtcatcgcggccaaagcc
gtggcgttgagagaggccctcacccccgagttccgcgtctaccaggagcagatcgtccgc
aacgcccgcgccctggcctccgcgcttcaggaccggggctggcggctggtctccgggggc
accgatacccacctgatgctggtggacgtcaagtcccggggcgtcacgggcaaggaggcc
gaggcccggctggaagcggtgggcatcaccgtcaacaagaacaccatccccttcgacacg
gagaagcccttcgtcgccagcggtatccggatcggcacgcccgcggtcacgacccgcggc
atgaaggagcccgagatggagcttatcgccggcctgatcgacacggttctctcgggctcg
cccggcgaagccgccctgcaggaggtggccgctcaggtccgggagctcaccgccgccttc
cctctctacccgggacttccgtga
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