KEGG   Limnochorda pilosa: LIP_0338
Entry
LIP_0338          CDS       T04150                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lpil  Limnochorda pilosa
Pathway
lpil03030  DNA replication
lpil03430  Mismatch repair
lpil03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LIP_0338
   03430 Mismatch repair
    LIP_0338
   03440 Homologous recombination
    LIP_0338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpil03032]
    LIP_0338
   03400 DNA repair and recombination proteins [BR:lpil03400]
    LIP_0338
Enzymes [BR:lpil01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LIP_0338
DNA replication proteins [BR:lpil03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LIP_0338
DNA repair and recombination proteins [BR:lpil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LIP_0338
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: BAS26195
UniProt: A0A0K2SGI3
LinkDB
Position
352319..352930
AA seq 203 aa
MAGVVDVETTGLSPRRDEIVELALILFAFDRATGHIQGVVDEYSGLREPSVPISAGASKV
NGITWEMVRGRRLDEPRVEQMLRRAEFLVAHNAPFDRSFLTRLFPLAGEKLWACSMRSVD
WRGLGFDSAALQSLLRHHGIMAERAHRGPEDAHATLALLSRVGPDNRPYFYWLLQSYRPQ
PSSPGLTRRRPRWTRPGHPEHSL
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggctggcgtggtggacgtggagaccaccgggctcagcccacgacgcgacgagatcgtg
gagctcgccctcattcttttcgccttcgaccgggcgacgggacacatccagggcgtggtg
gacgagtactccggcctgcgcgagccctcggtgcccatctcggccggggcctcgaaggtg
aacggcatcacctgggagatggtgcgcggccggcggctggacgagccccgggtggagcag
atgctccggcgggccgagttcctggtggcccacaacgcccccttcgaccgcagcttcctc
acccgtctcttccccctggcgggcgagaagctgtgggcctgttccatgcggagcgtggac
tggcggggcctcggtttcgattcggccgccctccagagcctgctgcggcaccacggtatc
atggccgagcgggcccaccgggggcccgaagacgcgcacgccaccctggcgctcctgagc
cgcgtcggccccgacaatcgtccctacttctactggctgctacagagctaccggccccag
ccgagcagtcccggtctcacccggcgccggccccgctggacccgtcctgggcaccccgag
cactcgttgtga

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