Limnochorda pilosa: LIP_0555
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Entry
LIP_0555 CDS
T04150
Name
(GenBank) D-ribose transporter ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
lpil
Limnochorda pilosa
Pathway
lpil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LIP_0555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpil02000
]
LIP_0555
Transporters [BR:
lpil02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
LIP_0555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_29
AAA_30
APS_kinase
TsaE
AAA_25
RsgA_GTPase
AAA_23
AAA_15
Dynamin_N
AAA_27
Motif
Other DBs
NCBI-ProteinID:
BAS26412
UniProt:
A0A0K2SH96
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All DBs
Position
578828..580366
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AA seq
512 aa
AA seq
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MTPLSVEAVLATRGLTKSFSGPPVVRDVDLDLRPGEVHALVGENGAGKSTFLRMLAGVHR
QDRGQILLDGAPVEVSSPSVAQSYGLALISQEPMLFPDLSVAENIVAGEYPVARPVPWVR
WGAMYLEAQELLESIGSNLDARQRVGGLSVAQQQMVEIATALARRARIVLMDEPTASLSP
REVDRLFGIVRTLIKRGASVVFVNHRLEEVFTIANRITILRDGAKVGTFPTSEITRDEVV
RRMVGRDLVWLYDKPPSQAGPVVLEVEHLTRRGVFHDVSFHVRRGEIVSLAGLVGAGRSE
VARAIFGVDPPDRGTVRVDGQPVRMRSPREALQAGLAYLPEDRQHQGLVLPLSVAQNITL
SILREVTRLGWLRTGAEEAIAGRLVERLQVKTDRVAQPVEQLSGGNQQKVLVGKYLVTHP
KVLILDEPTRGVDIGAKAEIHRLMGELAQQGLGILMISSELPEVLAMADRILVLREGRLV
KELSPDEATEETVMRAAVGALDGVPEGTCGAG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgctctcggtagaagcggtcctggccacccggggcctgaccaagtccttttca
ggccctcccgtggtgcgtgacgtggacctcgacttgcggccgggcgaggtgcatgccctc
gtgggcgagaacggggcgggcaagtccacgttcctgaggatgctcgcgggcgtgcaccgg
caggaccgcggccagatcctgctggatggggcgccggtggaggtctcctcaccctcggtc
gcccaatcgtacggtctcgccttgatctcgcaggagcccatgctcttcccggacctgagc
gtggccgagaacatcgtcgcgggcgagtaccccgtggcccgccccgttccttgggtgcga
tggggagccatgtaccttgaggcccaggagctcctggaatccatcgggagcaacctggat
gcccgccaacgggtgggaggcctctccgtcgcccaacaacagatggtggagatcgcgacg
gccctggcccgtcgggcacggatcgtgctcatggacgagccgacggcctccctctcgccc
cgggaggtggaccggctcttcgggatcgtccgcacgctgatcaagcggggggcgtcggtg
gtcttcgtcaaccaccggctggaagaggtcttcacgatcgcaaaccgcatcaccattctg
cgggacggggcgaaggtgggtaccttcccgacctcagagatcacccgggacgaagtggtc
cgccgcatggtagggcgagacctggtatggctctatgacaagccgccttcccaggccggg
cctgtggtgctggaggtggagcacctcacccgccgcggggtcttccacgatgtctcgttc
catgttcgccggggtgagatcgtgtcgcttgcggggttggtgggcgccgggcggagcgag
gtcgccagggcgatctttggcgtggacccacccgatcgcggaacggtacgcgtggacggc
cagccggtgcggatgcgctcgccgagagaggccctgcaggctggcctggcctacctgccc
gaggaccgccagcaccaggggctggtgctgccgctctcggtcgcgcagaacatcaccctt
tcgatcctgcgggaggtcacccgtctcggatggctgcgaaccggtgccgaggaggccatc
gccggccgcctcgtggagcgcctccaggtcaagacggaccgcgtggcccagccggtggag
cagctttcgggcggcaaccagcagaaggtgctggtgggcaagtacctggtcacccacccc
aaggtgctgatcctcgacgaacccacccgcggcgtcgacatcggcgccaaggccgagatt
caccggctcatgggcgagctggcccaacagggcctggggatcctgatgatctcctccgag
ctgcccgaggtgctggccatggcggaccggatcctggtactgcgggagggcaggctggtg
aaggaactgtccccggacgaggcaacggaggagacggtgatgcgggcggccgtcggagcg
ttggacggtgttccggagggaacctgcggtgcgggctga
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