Limnochorda pilosa: LIP_1200
Help
Entry
LIP_1200 CDS
T04150
Name
(GenBank) helicase
Organism
lpil
Limnochorda pilosa
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DSHCT
ResIII
Helicase_C
DEXQc_Suv3
AAA_30
AAA_16
AAA_22
nSTAND3
IstB_IS21
AAA_19
MTR4-like_stalk
AAA_11
PhoH
nSTAND_NTPase5
ATPase_2
ATPase
Sigma54_activat
NPHP3_N
Zeta_toxin
AAA_7
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAS27057
UniProt:
A0A0K2SJ51
LinkDB
All DBs
Position
complement(1267635..1269941)
Genome browser
AA seq
768 aa
AA seq
DB search
MEPTTYRGFALDPFQQEAIAHIDRGDSVLVAAPTGTGKTLIADYLIERMHRQGRRVVYTA
PIKALSNQKFKEFKRLLGEESVGILTGDVVVNPEAPILIMTTEVFRNLLHQDPARVEDVS
YCIFDEIHYIDDPERGSVWEESLIFMPPHMRLLGLSATIPNVEELATWTSQVHGHPVRVV
YQGERAVPLEHHLFERSLGFTTRDTLERRYRRYLHRAGLKFSDRARLPFRFEPTTHLDLL
ENLPPGLFPVLFFTFSRRKCELNALELARTGKAYLGPGEQQEVDDVIQEALETRVPSDGT
RKGSVGAQRLRSMRTLLLKGIAYHHAGLLPVVKDVVEELFERRLIRVLYCTETFAVGINF
PCRSVCFDSYSKWDGRSFRSLLNREYFQMAGRAGRRGIDAQGDVVTLVDFNYYVPQELPS
MDEKDVEAIRSRFALSYNTVLNLVEGYDQDEVARILSKSFATFQAGQERREHEARLRQLE
AERLRIQGCAYMETDRCPITLMERVAALEEKRREVASRLAQGKHRGVKRLRKEIREEEAA
LQALGVAGCPTSVVDRCRDLLPAYRRLGKRVDQLRERLAHLPSPERFLESYRQKRALLEA
LDYVRDGQLTARGFFASKINIQELLVTELHFDGWLHELEPDALNALAVSIDYEPRRTERR
LRHHVFETARVEATVQFLQEMERSFGQEPTVRFHDYLALLAYHWSAGETFAEILRRGDFD
EGDVVYAFRRAIDLLRQVRHAVRDDPYLSTKLQTCIDRMDRDEVAVVL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagcccacgacctaccgggggttcgcgctggatcccttccagcaggaagccatcgcc
cacatcgaccggggcgactcggtgctggtggccgcccctacggggacgggcaagaccctc
atcgcggactacctcatcgagcggatgcaccggcagggccggcgcgtcgtctacaccgcg
cccatcaaggccctgagcaaccagaagttcaaggagttcaagcggctgctgggcgaggag
tccgtgggcatcctgacgggcgacgtggtggtcaaccccgaggcgccgatcctcatcatg
accaccgaggtcttccgcaacctcctccaccaggacccggcccgggtggaggacgtgtcg
tactgcatcttcgacgagatccactacatcgacgaccccgagcggggcagcgtgtgggag
gagtccctcatcttcatgccgccccacatgcggctgctggggctctcggccaccatcccc
aacgtggaggagctggccacctggaccagccaggtgcatggccaccccgttcgggtggtc
taccagggcgagcgggcggtaccgctggagcaccacctcttcgagcgcagcctgggcttc
accacccgggacaccctcgagaggcgctaccgccgctacctgcaccgggcgggcctgaag
ttctcggaccgggcccggctccccttccgcttcgagcccaccacccacctggacctgctg
gagaacctgccgccaggcctcttccccgtcctcttcttcaccttcagccgccgcaagtgc
gagctgaatgccctcgagctcgcgcgcacgggcaaggcgtacctgggcccgggcgagcag
caggaggtggacgacgtgatccaggaagccctggagacccgcgtcccctccgacggcacc
cgcaagggcagcgtgggcgcccagcgcctccggtccatgcgcaccctcctcctgaagggc
atcgcctaccaccacgcgggcctcctcccggtggtgaaggacgtggtggaggagctcttc
gaacgtcgtctcatccgggtgctctactgcaccgagacctttgcggtgggcatcaacttc
ccctgccgctcggtctgcttcgactcctacagcaagtgggacgggcggagcttccgatcg
ctcctcaaccgggagtacttccagatggcaggccgcgcgggccggcggggcatcgacgcc
cagggcgacgtggtcaccctggtggacttcaactactatgtgccccaggaactcccctcc
atggacgagaaggacgtggaggcgatccggagccgcttcgccctctcctacaacacggtg
ctcaacctggtggagggctacgaccaggacgaggtggcccgcatcctctccaagagcttc
gccaccttccaggctggccaggagcgccgggagcacgaggcgcgcctgcgccagctggag
gcggagcggctgcgcatccagggctgcgcctacatggagacggaccgctgccccatcacc
ctcatggagcgggtggctgccctggaggagaagcggcgggaggtggcgagccgtctggcc
cagggaaagcaccgaggcgtcaaacggctgcgcaaggagatccgggaggaagaggcggcg
ctccaggcgctcggggtggcaggctgccccacctcggtggtggaccgctgccgggacctg
cttccggcctaccgccgcctgggcaagcgcgtggaccagctccgggagcgcctggcccac
ctgccgtcgcccgagcgcttcctggagagctaccggcagaaacgggcgctcctggaggcg
ctggactacgtgcgcgacggccagctcacggcccgggggttcttcgcctccaagatcaac
atccaggagctcctggtcaccgagctccacttcgacggctggctccacgagctggagccc
gacgcgctgaacgccctggccgtctccatcgactacgagccccggcgcaccgagcgccgc
ctgcgccaccacgtcttcgagaccgcccgggtggaggcaacggttcagttcctccaggag
atggagcgctccttcggccaggagcccaccgtgcgctttcacgactacctggccctcctc
gcctaccactggagcgcgggcgagaccttcgccgagatcctccggcggggcgacttcgac
gagggcgacgtggtctacgccttccgccgggccatcgacctcctccgccaggtgcggcac
gccgtccgggacgacccctacctctccaccaagctccagacctgcatcgaccgcatggac
cgcgacgaggtggcggtggttttgtag
DBGET
integrated database retrieval system
