Limnochorda pilosa: LIP_1274
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Entry
LIP_1274 CDS
T04150
Name
(GenBank) ROK family transcriptional regulator
Organism
lpil
Limnochorda pilosa
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_24
MarR_2
MarR
SMC_ScpB
HTH_Crp_2
HTH_IclR
HTH_27
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BAS27131
UniProt:
A0A0K2SJ31
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Position
1352327..1353568
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AA seq
413 aa
AA seq
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MSGDRVTVLKGNNDLVKAINTRTVLNVIRQHAPVSRAEIGRLAALYPATVSTIVTSLLEE
GLVKETGRGESTGGRQPVLLELNAGAHRVVGLFVGVGRLAAVVSDLKGAVVARWTEEVPR
AGPQEILPRLVEGTRSVLRSAGVGEEGVLGVGVAFPGPVDVEEGVVLASPNLPGWGRFPL
KEALTSRLGLECVVDNDANAAAWGERWLGGPDALEMLYLVFDWSVGGGIVVDGQIYRGWR
HAAGEFGHVVVETGGAQCTCGNFGCLHTVASGEALVARVQRDAKQGASTLALELAGGDPD
GIDLDAVFQAADANDPRVLALLEEAGRYAGIGVASLINAFNPRTVVLGGRLVHRSATFYR
RLAETALRRAWSAVARDVQVTRGNLGDDAFVLGAASLVLSRLFLQPRLPVGAL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaggagatcgggtcacggtcctcaaggggaacaacgacctcgtcaaggcgatcaac
acccgcacggtgctgaacgtcatccgccagcacgcgcccgtctccagggccgagatcggg
cggctggccgcgctttacccggccacggtgtccacgatcgtaacctcgctgctcgaggaa
ggtctggtgaaggagacgggccggggcgagtccaccggcgggcgccagccggtcctcctg
gagttgaacgcgggcgcgcatcgggtggtggggctcttcgtgggggtcggaaggctggcg
gccgtagtttctgacctgaaaggcgcggtggtcgcccgctggaccgaggaagtccccagg
gccggtccccaggagatcctcccgcggctggtggagggcactcgttccgtgctgcgctcg
gccggggtgggtgaggagggcgtcttgggggtgggcgtcgcctttccaggtccagtggat
gtggaggagggcgtcgtcctcgcctcgcccaacctccccggatggggccgtttcccactg
aaggaggcactcacctcccggttgggcctcgagtgcgtggtggacaacgacgccaacgcc
gcggcgtggggcgagcggtggctgggcggtccggacgcgctggagatgctctacttggtc
ttcgactggtccgtgggcggcggcatcgtcgtcgacggacagatctaccggggctggagg
cacgctgccggcgagttcggccacgtggtggtggagacagggggtgcccagtgcacctgc
gggaacttcggctgcctccacacggtggcttccggtgaggccctggtggcccgcgtgcag
agagacgccaagcagggagcctccaccctcgcgctggaactcgccggcggggatcccgac
ggcatcgacctcgatgccgtcttccaggcggccgatgccaacgaccccagggtccttgct
ctcctggaggaagcgggccggtacgcgggcatcggcgtggccagcctcatcaatgcgttc
aacccccggaccgtggtgctcggcgggaggctggtgcaccggagcgccacgttctatcgc
cggctcgcggagacggccctgcgccgggcctggagcgcggtggccagggacgttcaggtg
acgcgtggcaacctgggggacgatgcttttgtcctgggggctgcctcgctggtgctgagc
cgcctcttcctccagccccgccttccggttggggcgctctga
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