Limnochorda pilosa: LIP_1329
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Entry
LIP_1329 CDS
T04150
Name
(GenBank) ATP-dependent protease
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
lpil
Limnochorda pilosa
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lpil03110
]
LIP_1329
Chaperones and folding catalysts [BR:
lpil03110
]
Heat shock proteins
HSP100
LIP_1329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
zf-C4_ClpX
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
RuvB_N
MCM
Sigma54_activat
AAA_22
Sigma54_activ_2
AAA_7
AAA_14
IstB_IS21
AAA_18
NACHT
DEAD
T2SSE
TIP49
AAA_16
nSTAND3
ABC_tran
TsaE
AAA_8
ResIII
THP2
PduV-EutP
AAA_28
Rad17
AAA_33
AAA_24
RNA_helicase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAS27180
UniProt:
A0A0K2SJC3
LinkDB
All DBs
Position
1411308..1412564
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AA seq
418 aa
AA seq
DB search
MFKFGDEKGQLKCSFCGKAQEQVKKLIAGPGVYICDECIELCNEIIEEELNDDVEVELDS
LPRPKEIKEILDQYVIGQEDAKKTLSVAVYNHYKRINSGVRVDDVELQKSNILMLGPTGS
GKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLIQAAEYDVEKAEKGIVYI
DEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNI
LFICGGAFDGLEKLIERRIGHRTMGLTADVKPREEKKIGELLRQIMPEDLLRYGMIPEFV
GRVPIIVSLDALDEEALVRILVEPRNALVKQFAKFLEMDGVELHFEEEALQTIAQKALER
KTGARGLRAIMEETLIDVMYEIPSRTDVKRCVITAGVIEGREAPRLYPEIRKAKEETA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagttcggggacgagaagggccagctgaaatgctccttctgcggcaaggcgcag
gagcaggtcaagaagctgatcgccggccccggcgtctacatctgcgacgagtgcatcgag
ctctgcaacgagatcatcgaagaagagctcaatgacgacgtcgaggtggagctggacagc
ctcccgcgccccaaggagatcaaggagatcctggaccagtacgtcatcggccaggaggac
gccaagaagaccctctccgtcgccgtgtacaaccactacaagcgcatcaactccggggtc
cgggtggacgacgtggagcttcagaagagcaacatcctcatgctgggtcccaccggctcc
gggaagaccctgctcgcccagaccctggccaagatcctcaacgtccccttcgccatcgcc
gacgccacctcgctcactgaggcgggctacgtgggcgaggacgtggagaacatcctcttg
aagcttatccaggcggccgagtacgacgtggagaaggccgagaagggcatcgtctacatc
gacgagatcgacaagatcgcccgcaagtctgagaacccctccatcacccgcgacgtctcg
ggcgagggcgtgcagcaggcgctcctcaagatcctggagggtacggtggccagcgtgccg
ccccagggtgggcgtaagcacccccaccaggagttcatccagatcgacaccaccaacatc
ctcttcatctgcggcggcgccttcgacgggttggagaagctgatcgagcgccggatcggc
caccgtaccatgggcctcaccgccgacgtcaagccgcgggaggagaagaagatcggcgag
ctcctccgccagatcatgcccgaggacctcctccggtacgggatgatccccgagttcgtg
ggccgggtgcccatcatcgtctccctggacgcgctggacgaggaggcgctggtgcggatc
ctggtggagccgcggaacgccctggtgaagcagttcgccaagttcctggagatggacggg
gtggagctccacttcgaggaggaggcgctccagaccatcgcccagaaggcgttggagcgc
aagacgggagcccgcggcctccgtgccatcatggaggagacgctcatcgacgtcatgtac
gagatcccgtcgcgcacggacgtgaagcggtgcgtcatcacggccggggtgatcgagggc
cgcgaggccccgcgcctctaccccgagatccgcaaggccaaggaagagacggcctga
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