Limnochorda pilosa: LIP_1497
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Entry
LIP_1497 CDS
T04150
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil03030
DNA replication
lpil03410
Base excision repair
lpil03420
Nucleotide excision repair
lpil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LIP_1497
03410 Base excision repair
LIP_1497
03420 Nucleotide excision repair
LIP_1497
03440 Homologous recombination
LIP_1497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpil03032
]
LIP_1497
03400 DNA repair and recombination proteins [BR:
lpil03400
]
LIP_1497
Enzymes [BR:
lpil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LIP_1497
DNA replication proteins [BR:
lpil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LIP_1497
DNA repair and recombination proteins [BR:
lpil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LIP_1497
NER (nucleotide excision repair)
GGR (global genome repair) factors
LIP_1497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DprA_N
HHH
RecR_HhH
HHH_2
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
BAS27345
UniProt:
A0A0K2SJS4
LinkDB
All DBs
Position
1596481..1599219
Genome browser
AA seq
912 aa
AA seq
DB search
MLVDAHSLIHRAYHALPPLRTRDGQPTQAVYGFTAMLIKLLQEERPEYVAVSFDLQGPTF
RHQAFAGYKAQRPSMDDELASQIPLVYQVVESLRLPVHQLEGFEADDCLGTLARQGEALG
LRVLLLTGDRDLLQLVDGSVSALLTRKGLSELERLDPPGVERLLGVPPEKVTDYKALVGD
PSDNIPGVPGVGPKTAARLLAQYGSLEAVLDHAAEVAGRTGQALRENREAALQGKMLTTI
RCDLPLELDLDRCRVRPPEAGPVRDLFHRLEFTSLLHRLGVLFPGAGLDGAGAEGGGTGG
AGEGKEGEATGPGRSPEAQATVLADGAALARWLEDLPPGEPVAVEWLADGPDALAAPLVG
VSVGRPGEVAYLPLDKGARNGLEALGELLASGRIKWVHDLKRQIHLGRRLGLELKPPAFD
LLLAGYLLRPGEGRYDPGDLARRWLDDELPLLQEEVEGRGKKLEPLATVPPERLAGRLAA
RLRRYGALAHRLEAEMEQDGLLSLFREVELPLAWVLAGMEERGVRVDPEVLRRLSDELDG
RIEALAEGVYGIAGERFNLNSPKQLGVILFERLGLPVLQRTKTGPSTSAEVLEELADQHE
VAALILVHRQLVKLKGTYIDALPELIRPGTGRVHTTFHQTVAATGRLSSSDPNLQNIPIR
TGEGEKIRAAFVPGEPGWVLLAADYSQIELRVLAHISGDPGLIDAFRSGMDIHTRTAAEV
FGVAPEQVSSSMRTAAKAINFGIVYGISSYGLARGTGLSRAEAQAYIDGYFARYPGVRRY
MDEVVEQARREGYVTTLLGRRRYLPDLLARDRTRRAFAERTAMNTPIQGSAADIIKLAML
RVDERLRQAGHQARMLLQVHDELVFECPQEEVAGVAGLVREAMEGVVSLEVPLRAEVEAG
PNWLETRPVADS
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtggatgcgcacagcctcatccaccgggcgtaccacgccctgccgcccctgcgg
acccgagacgggcagcccacccaggcggtctacggcttcaccgccatgctcatcaagctc
ctgcaggaggagcgtcccgagtacgtggccgtctccttcgacctccagggccccaccttc
cggcaccaggccttcgccgggtacaaggcccagcgcccatccatggacgacgagctggcg
agccagatccccctggtgtatcaggtggtggagagcctccgcctgccggtccaccagttg
gagggcttcgaggccgacgactgcctgggcacgctggcccgccagggcgaggccttgggc
ctgcgggtgctgctcctcacgggcgaccgggacctcctccagctcgtggacggctccgtt
tcggccctcttgacacgtaagggcctcagcgagctggaacggctggacccgccgggcgtg
gaacggctgctgggggtgccgcctgagaaggtgaccgactacaaggccctggtgggcgat
ccttccgacaacatccccggcgttccgggggtcggacccaagacggcggcgcgcctgctc
gcgcagtacggcagcctcgaggcggtgctggaccacgccgctgaggtcgcggggcgcacg
ggccaggccctccgggagaaccgggaggccgccctccaggggaagatgctcaccaccatc
cgctgcgacctcccgctggagctggacctggaccgctgccgcgtgcgtccccccgaggcc
ggcccggtgcgcgacctcttccaccgcctggagttcacctcactcctgcaccggctgggc
gttctctttcccggggcgggcctcgatggcgcaggagcggaaggcggcggcaccgggggc
gcaggcgaggggaaggagggggaggcgacgggccccgggcggagcccggaagcccaggcg
acggtcctggccgacggcgcggccctggcccgctggctggaggatctgccccccggggaa
cccgtggcggtcgagtggctggccgacgggccggacgccctggcagctcccctggtgggg
gtgtccgtgggccggcccggcgaggtggcctacctacccttggacaagggcgcacggaac
ggcttggaggccctgggcgagctcctcgcgagcgggcggatcaagtgggtccacgacctg
aagcgccaaatccacctgggccgccgcctggggctggagctgaagcctcccgccttcgac
ctcctgctggccggctacctcctgcggccgggcgagggacgctacgatccgggggacctg
gccaggcgctggctcgacgacgagctgccgctcctgcaggaagaggtggaagggcgcggc
aagaagctggaacccctggcaacggttccgcccgagcggctggccggccggctcgcggcg
cggctgcgccggtacggggccctggcccaccggctggaggccgagatggagcaggacggc
ctgctctccctcttccgggaggtggagctgcccctggcctgggtgctggcgggcatggag
gagcggggcgtccgggtggaccccgaggtgctccggcggttgagcgacgagctggacggc
cgcatcgaggcgctggccgaaggggtctacggcatcgcgggggagcggttcaacctcaac
tcccccaagcagctgggcgtgatcctcttcgagcggctgggcctgcccgttctccaacgg
accaagacgggcccctccacctcggccgaggtgctggaggagctggccgaccagcacgag
gtcgcggcgctcatcctggtccaccgccagctcgtgaagctgaagggcacctacatcgac
gccctcccggagctgatccgccccgggacgggccgggtccacaccaccttccaccagacg
gtcgcggccacggggaggctctccagctcggatcccaacctccagaacatccccatccgg
acgggtgagggcgagaagatccgggccgccttcgtgccgggcgagccgggctgggtcctg
ctggccgccgactactcgcagatcgagctcagggtgctggcccacatctcgggcgacccg
gggctgatcgatgcctttcgcagcggcatggacatccacacccgcaccgcggccgaggtc
ttcggggttgcccccgagcaggtgtcgtcctccatgcgcaccgccgccaaggccatcaac
ttcgggatcgtctacggcatctcgagctacggcctggcccggggcacgggcctctcccgg
gccgaggcccaggcgtacatcgacggctacttcgcccgttaccccggggtgaggcggtac
atggacgaggtggtggagcaggcgcgccgggaagggtacgtcaccaccctcctggggcgc
cgccggtacctgccggacctgctggcccgcgaccggacccggcgcgccttcgccgagcga
accgccatgaacacgcccatccaggggagcgcggccgacatcatcaagctggccatgctc
cgggtggacgagcgcctgcggcaagcgggccaccaagcccggatgctcctgcaggtccac
gacgagctggtcttcgagtgcccacaggaggaggtggcaggggtggccgggctggtgcgg
gaggccatggaaggggtggtctccctggaggttcccctccgggcggaggtggaggcgggg
cccaactggctcgagacgcgccccgtggccgattcctga
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