Limnochorda pilosa: LIP_1588
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Entry
LIP_1588 CDS
T04150
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LIP_1588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpil03400
]
LIP_1588
Enzymes [BR:
lpil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIP_1588
DNA repair and recombination proteins [BR:
lpil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LIP_1588
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
zf-CHY
TrwB_AAD_bind
AAA_22
AAA_16
AAA_19
nSTAND3
AAA_30
nSTAND6
PIF1
Viral_helicase1
zf-Sec23_Sec24
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
BAS27435
UniProt:
A0A0K2SK09
LinkDB
All DBs
Position
1690543..1692744
Genome browser
AA seq
733 aa
AA seq
DB search
MAVDLPLPGAMESLDYAVPERLRPQVRLGTRVQVPVRARAVQGWVVAVHQGPPTRPLREV
AVVLDSEPLLGPEELDLARWVAARYLAPLGQVLPLFLPPGQRPDRRRTVRERHLRAYRLA
VSEEAARAALAELVRAPRQRQALEFLLEQESGPVPARELAARAGDGAARGLLERGLVEAV
PLSLERNPYAGWRDPTPPPRLSPEQAQVLQEASRRLEGGGTILLHGVTGSGKTEVYLRLI
ETVLARGKQAILLVPEISLTPQAMRRFQGRFPGRVAMLHSGMSDGERYDQWWKVRRGEAS
VVVGARSAVFAPVRDLGLVVVDEEHASSYKQEETPRYHAREVAVERARRQGALCVLGSAT
PSLESFLAAEEGRLVRLQLRHRVDGRSLPRVRLVDLRQELKEGHQGLFSRALEQALASRL
ERDEQAILLLNRRGYQSFLLCRECGAVVECPHCQVTLTYHKVGHALRCHYCGTEQPVPER
CPACGTGELSGLGLGTQQVEEELRRLFPAARVLRMDADTTTRKGAHDQILRRFEAGEGDV
LVGTQMVAKGLDYPGVTLVGVIDADTSLRLPDFRGAELAFQLVTQVAGRSGRGVLPGEVV
VQTYLPEHYSLQAAREHDYPSFFRRELVYRKRLGYPPLSHLLRLLVQAPAADAAEDEAGA
LARELKERRRGGAPYRVLGPAPAPLGRLKDLYRWHVLLVGPLEALLEAGRAVRERRPGRS
CQVVEDMDPVSLL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtggacctgccgctgcccggagcgatggagagcttggactacgcggtgcccgag
cgcctccgcccgcaggttcgcctgggaacccgggtgcaggtaccggtgcgggcccgcgcc
gtgcagggctgggtggtggccgtgcaccaggggccgcccacccggccgctgcgcgaggtg
gccgtggtgctggactcggagccgctgctggggcccgaggagctggacctggcccgctgg
gtggccgcgcggtacctggccccgctggggcaggtactacccctcttcctgccgcccggc
cagcggccggatcgccggcggaccgtgcgcgagcggcacctgcgcgcctaccgcctggcc
gtttcggaggaggcggcgcgggcggcgctggcggagctggtccgagcgccccgccagcgc
caggcgctcgagttcctgctggagcaggagagtggcccagtgccggctcgggagctggcc
gcccgggcgggggacggcgcggcccgcgggctgctggagcggggcctggtggaagcggta
ccgctctcgctggagcggaacccctacgccggctggcgggaccctacgcctccgccccgg
ctgagcccggagcaggcccaggtgctgcaggaggcgtcccgccgcctggagggaggcggc
acgatcctcctccacggggtcacggggagcggcaagaccgaggtgtacctgcgcctgatc
gagacggtcctcgcccggggaaagcaggcgatcctgctggtccccgagatctccctcacg
ccccaggccatgcgccgcttccagggccgcttccccgggagggtggccatgctccactcg
ggcatgtccgacggggagcgctacgaccagtggtggaaggtgcgccggggcgaggcgtcg
gtggtggtgggcgcccgttcggcggtcttcgcccccgttcgcgacctggggttggtggtg
gtggacgaggagcacgcctcgtcctacaagcaggaggagaccccccgctaccatgcccgg
gaggtggcggtggagcgggctcgccgccaaggcgccctgtgcgtgctgggaagcgccacc
ccttccctggagagtttcctggccgccgaggaagggcggctggtgcggctccagctccgt
caccgggtggacgggcgctcgcttccccgcgtgcgcctggtggacctgcggcaggagttg
aaggaggggcaccaggggctcttcagccgcgcgttggagcaggcgctcgcctcgcgcctc
gagcgcgacgagcaggcgatcctgctcctcaaccggcggggataccagagcttcctcctc
tgccgggagtgcggggcggtggtggagtgcccccactgccaggtgacgctcacctaccac
aaggtgggccacgcgttgcgctgccactactgcgggaccgagcaaccggtccccgagcgg
tgcccggcgtgcggtaccggcgagctgagcgggctgggcctggggacccagcaggtggag
gaggagctgcggcggctctttccggcggcgcgggtgctccgcatggacgcggacaccacc
acccgcaagggcgcccacgaccagatcctccggcggttcgaggccggagagggcgatgtt
ctggtgggcacccagatggtggccaagggcctggattaccccggcgtcacgctggtgggg
gtcatcgacgccgacacctccctgcgcctgcccgacttccggggcgccgagctggcgttc
cagctcgtcacccaggtggcgggccgctcggggcggggggtgctgcccggcgaggtggtg
gtgcagacctacctacccgagcactacagcctgcaggccgcccgcgagcacgactaccca
tccttcttccggcgggagctcgtttaccggaagcggctgggttacccgcccctcagccac
ctgctgcggctgctggtgcaggctcccgccgcggacgcggccgaggatgaagccggggcg
ctggcccgcgagctgaaggagcggcggcgagggggggcgccctaccgggtgttgggaccg
gcccccgccccgctgggccgcctgaaggacctgtaccggtggcacgtgctcctggtgggt
cctctggaagccctgctcgaagcggggcgggcggtgcgcgagcggcggccggggcggagc
tgccaggtggtggaggacatggatcccgtcagcctgctgtga
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integrated database retrieval system
