Limnochorda pilosa: LIP_1645
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Entry
LIP_1645 CDS
T04150
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lpil
Limnochorda pilosa
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpil03032
]
LIP_1645
03400 DNA repair and recombination proteins [BR:
lpil03400
]
LIP_1645
Enzymes [BR:
lpil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LIP_1645
DNA replication proteins [BR:
lpil03032
]
Prokaryotic type
DNA Topoisomerases
LIP_1645
DNA repair and recombination proteins [BR:
lpil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LIP_1645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_3
Zn_ribbon_recom
Auto_anti-p27
Zn_ribbon_PaaD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAS27491
UniProt:
A0A0K2SK47
LinkDB
All DBs
Position
1742680..1744944
Genome browser
AA seq
754 aa
AA seq
DB search
MAKSLVIVESPAKAKTIGRFLGRTYQVKASMGHVRDLPKSQFGVDVENGFQPRYITIRGK
GKVVQELREAARKAERIYLATDPDREGEAISWHLMSALDLQEDRAQRIEFHEITADAIRH
AVKNPRALDLRRVEAQQARRVLDRVVGYQLSPLLWAKVRRGLSAGRVQSVAVRLICDRQA
EIDAFEPQEYWTVDVTLRALAGEEPQGPASASQGHPNGRAKRAAGLEPAVFVARVERRGG
KKLEIPSESEARRVVEEVAAQETRVASVEEKERRRSPYAPYTTSTLQQDASHRLRFPASK
TMRLAQQLYEGLDLGPEGHSGLITYMRTDSTQVAAQAQAEARALIEETYGAPFCPARPPK
YKNRAGAQAAHEAIRPTSVRRTPDQVAPYLGRDQLRLYRLIWERFVASQMSPARYQTVSV
RVGAGPYELRATGSRLLFPGFLRVYEVDEADESRAQRAPLPPLREGQLLEQVERKPEQHF
TQPPPPYTEASLVKSLEELGIGRPSTYAPIIETIQKRGYVELADRKFVPTELGRVVVDLL
KEYFPDIVDVEFTARMEAELDEVEEGKEDWVSLVRSFYGPFAKELEVARQKVGRVEVADE
ETDEVCDKCGRKMVIKHGRFGKFLACSGFPECRNTRPILEPVGVDCPECGHPLVRRRSRR
GKTFYGCSNYPECRFVLWQKPVPARCPRCGSLLVEGRGRAGAGRGRGAGRPPGATEWVCP
TKGCGHRQPAPSGARPEGTRARTSQEEEPELARV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagtcgctggtcatcgtggagtcaccggccaaggccaagaccattggccgattc
ctcgggcggacgtaccaggtgaaggcctccatgggccacgtgcgcgacctgcccaagagc
caattcggcgtggacgtggagaacggcttccagccccgctacatcaccatccggggcaag
gggaaggtggtgcaggagctgcgggaggccgcccggaaagcggaacggatctacctggcc
accgaccccgatcgggagggcgaggccatctcctggcacctcatgagcgccctcgacctc
caggaggaccgcgcgcagcggatcgagttccacgagatcacggccgacgccatccgccac
gcggtgaaaaacccgcgggccctggacctgcggcgggtggaggcccagcaggcgcggcgg
gtgctggaccgggtggtgggctaccagctcagcccgctcctctgggccaaggtgcgccgc
ggcctcagcgccgggcgtgtgcagtcggtggcggtgcggctcatctgcgaccgccaggcc
gagatcgacgccttcgagccgcaggagtactggacggtcgacgtcaccctccgggccctg
gccggcgaggagccccaggggcccgccagcgcgtcccaagggcacccgaacggccgggcg
aagcgcgcggccgggctcgagcccgccgtcttcgtggcgcgggtggagcggaggggcggc
aagaagctcgagatccccagcgagtccgaggcccggcgggtggtggaggaggtggccgcc
caggagacccgggtggcgtcggtggaggagaaggagcgacggcggtcgccctatgcgccg
tacaccaccagcaccctccagcaggacgcctcgcaccggctccggttccccgcgtccaag
accatgcgcctcgcgcagcagctctacgagggcctcgacctgggtcccgaggggcattcc
ggcctcatcacctacatgcgtaccgactccacccaggtggcggcccaggcgcaggccgag
gcgcgggccttgatcgaggagacgtacggtgcgcccttctgcccggcccgcccgcccaag
tacaagaaccgggccggcgcccaggccgcgcacgaggcgatccggcccacctccgtccgg
cggacgccggatcaggtggcgccgtacctgggccgcgaccagctccgcctctaccggctg
atctgggaacgcttcgtggccagccagatgagccccgcccgctaccagacggtgagcgtg
cgggtgggggcggggccgtatgagcttcgcgccacgggatcgcgcctcctcttcccgggg
ttcctgcgcgtctacgaggtggacgaggccgacgaatcccgcgcccagagggcacccctg
cccccgctccgggagggccagctcctggagcaggtggagcggaagcccgagcagcacttc
acgcagccgcctcccccctacaccgaggcctccctggtgaagagcctggaggagctgggc
atcggccgccccagcacctacgcccctatcatcgagaccatccagaagcggggttacgtg
gagctggcggaccggaagttcgtccccaccgagctgggccgggtggtggtggacctgctc
aaggagtacttccccgacatcgtggacgtggagttcaccgcccgcatggaggcggagctg
gacgaggtggaagaggggaaggaagactgggtctcgctggtccgcagcttttacggtccc
ttcgccaaggagctggaggtggcccggcagaaggtgggccgggtcgaggtggccgacgag
gagaccgacgaggtctgcgacaagtgcggccgcaagatggtgatcaagcacggccgcttc
ggcaagttcctggcctgctcgggcttccccgagtgccgcaacacccggcccatcctggaa
cccgtgggcgtcgactgccccgagtgcggccacccgctggtgcggcgccgctcgcggcgg
ggcaagaccttctacggctgctccaactaccccgagtgccgcttcgtcctttggcagaag
ccggtaccggcccgctgcccccggtgcggcagcctcctggtggaggggcgggggcgggcc
ggcgccggccggggccggggcgccgggcgccccccgggcgcgaccgagtgggtctgcccc
accaagggctgcggccaccggcagcccgcgccctcgggcgcgcgcccggagggcacccgg
gcgcgcacctcccaggaggaggagcccgagctggcccgggtctag
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