Limnochorda pilosa: LIP_1688
Help
Entry
LIP_1688 CDS
T04150
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
lpil
Limnochorda pilosa
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpil03021
]
LIP_1688
03009 Ribosome biogenesis [BR:
lpil03009
]
LIP_1688
Transcription machinery [BR:
lpil03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LIP_1688
Ribosome biogenesis [BR:
lpil03009
]
Prokaryotic type
rRNA transcription factors
LIP_1688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_2
KH_1
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
BAS27534
UniProt:
A0A0K2SL07
LinkDB
All DBs
Position
1784727..1786373
Genome browser
AA seq
548 aa
AA seq
DB search
MNLELVGALNELEQERGISKEILLSAIESAIVSAYKRNFSNAENVRVEVDERSGTISVYA
QKEVVGEVADANVQISLEAAREVDPSYKPGDVVEVEVTPRDFGRIAAQTAKQVVIQRIRE
AERALIYDEFSNRAEDIVTGTVQRVDRRNVYVDLGKVEALLPPSEQMPGDNYHRGQRLKT
YIAEVRQTPKGPQVILSRSHPGLLKRLFELEVPEIRDGVVEIRAAAREAGKRSKIAVWSR
DDRVDPVGACVGPRGIRVQAVVQELRGEKIDIIQWDPDLRRFVKNALSPAKVSDVFISKD
QETATVVVPEYQLSLAIGKEGQNARLAAKLTGLRIDIKSEAQMAEMIFTQAQPRTEEPAV
EPVEAETVEPEPVLAEAAPQAEPALEPELEPEELEPVAELAEAPEEPEPAFELELEEPEP
EPEEPKRAKTPPAARKAKTRVARQEIEEAIEADVDTEEEELPSLFGDEEERAAAPKAAAE
ETVFVSGNEEPDTDERLDRLSRLFQNREQAAREMAERQAKKEREKERRAKSKGVVKDLSE
LAKLLNRE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggaactggtgggggctctcaacgagctggagcaggagcgaggcatctccaag
gagatcctgctctcggccattgagtcggccatcgtttccgcatacaagcggaacttcagc
aatgccgagaacgtgcgggtggaggtggacgagcgctcgggcaccatctccgtctacgcc
cagaaggaagtggtcggcgaggtcgcggacgcgaacgtgcagatctcgctggaagcggcc
cgggaggtggatccctcctacaagccgggcgacgtggtggaggtggaggtcaccccgcgc
gacttcggccgcatcgccgcgcagacggcgaaacaggtggtcatccagcgtattcgcgag
gccgaacgggcgctcatctacgacgagttctccaaccgggccgaggacatcgtcaccgga
accgtccagcgcgtcgaccggcgcaacgtctacgtcgacctgggcaaggtggaggccctc
cttccgccctcggagcagatgccgggcgacaactaccaccggggccagcggttgaagacc
tacatcgccgaggttcgccagacgccgaagggaccgcaggtgatcctctcccggagccat
ccggggctcctcaagcggctcttcgagttggaggtgcccgagatccgcgacggcgtcgtg
gagatccgggcggccgcccgggaggcgggcaagcgctccaagatcgccgtctggtcgcgc
gacgaccgggtggatcccgtgggcgcctgcgtgggaccccggggcatccgggtccaggcg
gtggtgcaggagctccggggcgagaagatcgacatcatccagtgggatcccgacctgcgc
cgcttcgtgaagaacgcgctgagcccggccaaggtctccgacgtcttcatcagcaaggat
caggagaccgccaccgtggtcgtgcccgagtaccagctctcgctggccatcggcaaggaa
gggcagaacgcacgcttggccgccaagctgacgggtctgcgcatcgacatcaagagtgag
gctcagatggcggagatgatcttcacccaggcccagcccaggacggaggagcctgcggtc
gaaccggtggaggccgagacggtggagcccgagcccgtcctggccgaggctgcgccccag
gcggagcccgcgctcgaacccgagctggagccggaggagctcgaacccgtggccgagctg
gcggaagcacccgaggagccggagcccgccttcgagctggagctcgaggagcccgaaccg
gaacccgaggagcccaagcgggccaagacgccgccggcggcccgcaaggccaagacccgg
gtggcccgccaggagatcgaggaggccatcgaggccgacgtggacaccgaggaagaggag
cttccctcgctcttcggcgacgaggaggagcgggcggcggctcccaaggcggccgcggag
gagacggtcttcgtctcggggaacgaggagccggacaccgacgagcgactggaccgtctc
agccgcctcttccagaaccgcgagcaggcggcccgcgagatggcggagcggcaggccaag
aaggaacgggagaaggagcgccgggccaagtccaagggtgtcgtcaaggatctctcggag
cttgccaagctcctgaaccgggagtga
DBGET
integrated database retrieval system
