Limnochorda pilosa: LIP_1696
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Entry
LIP_1696 CDS
T04150
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lpil
Limnochorda pilosa
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpil03016
]
LIP_1696
Enzymes [BR:
lpil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LIP_1696
Transfer RNA biogenesis [BR:
lpil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LIP_1696
Prokaryotic type
LIP_1696
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAS27542
UniProt:
A0A0K2SKJ7
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All DBs
Position
1791364..1792377
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AA seq
337 aa
AA seq
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MNGAVVGALNVLKPPGMSSHDVVGVVRRLAGLRQVGHAGTLDPGAAGVLPVLLGPATRLL
PFLPVQRKAYRAEMTLGVRTDTGDGWGRTVEIRTDFRIPPARVGDVLAGFVGEQLQAPPA
VSARHHGGERLYELFRRGVEVELTPRRVLIHEIHVVRILPDDPHALTFGARILFDLSCSP
GTYVRSLCADAGERLGCGAHLSFLVRTASGPHRLEESHTLEELERAAAAGRLEELLVPPA
QMVAHLPAFRVDEPAVLERLRHGNAVALEGFPREAPAPGMRSGPGEPPEPPAGLARVLDG
AGRLVCLVRAAGAVNGGASGTWQPVRVLEPVGGGEPR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggcgccgtggtgggcgcgctgaacgtgctcaagccaccggggatgagctcccac
gacgtggtgggtgtggtgcggaggctcgcgggtttgcggcaggtcgggcacgccggcacc
ctggacccgggggcggcgggcgtccttccggtgctgctcgggccggcgacgcggctgctc
cccttcctcccggtgcaacggaaggcgtaccgggccgagatgaccctgggcgtgcgcacc
gacacgggggacggctggggccgcacggtggagatccgcaccgacttccgcatcccgccc
gcgcgggtgggagacgtgctcgcggggttcgtgggcgagcagctccaagcgcccccggcg
gtctcggcccgccaccatggaggcgaacgcctctacgagctcttccgcaggggcgtggag
gtcgagctcaccccccggcgggtgctgatccacgagatccacgtggtgcggatccttccc
gacgaccctcacgcgctcaccttcggggcgcggatcctcttcgacctctcctgctcgccg
ggcacctacgtgcgctcgctctgcgcggacgcgggcgagcgcctgggctgcggggcccac
ctctccttcctggtgcgcaccgcgtccggaccccatcgcctggaggagagccacaccctg
gaagagctcgagcgcgcggcggccgccggaaggctggaagagctgctggtccccccggcc
cagatggtcgcgcaccttcccgccttccgcgtggacgagcccgcggtgctggagcgcctg
cgccacggcaacgcggtggcgttggaggggttcccccgtgaggcgcctgcccccgggatg
cgctccgggcccggggagcccccggagccgcccgccggcctggctcgggtcctggacggt
gcaggccgcctggtctgcctggtgcgggcggccggtgccgtgaatggcggggcctccggc
acgtggcagcccgtgcgggtcctggaacccgtgggaggaggtgagccgcgctga
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