Limnochorda pilosa: LIP_1869
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Entry
LIP_1869 CDS
T04150
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
lpil
Limnochorda pilosa
Pathway
lpil00550
Peptidoglycan biosynthesis
lpil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LIP_1869
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpil01011
]
LIP_1869
Peptidoglycan biosynthesis and degradation proteins [BR:
lpil01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LIP_1869
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BAS27712
UniProt:
A0A0K2SL40
LinkDB
All DBs
Position
complement(1973922..1976027)
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AA seq
701 aa
AA seq
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MRAAYTRAQVRRRIAVLFLVTLAGALLLAARLVYLQLIRSDAFRELALDQRLRPVPVLAQ
RGKIVDRHGSPLAVSVAADSVYAVPVEVRDVPATTRQLAALLNLDAARVEGLLRQRSASV
WIARKVPPEQAEAVRRARLPGIYLVERPQRYYPHGSLAAQVLGIAGIDNQGLEGIEFAYD
EVLRGVPGRDLAERDAAGRVIPHGERVYLPPEPGKDVVLAIDQVIQYIAEREIQAAVERT
KSDFGLFVAMKPDTGEVVALALSPSFDPNAYGGASAELRRNRVVTDQFEPGSIFKVVTAT
AALDQGVVKPDDRFFDPGYVEIGGGMVRSWRPGGHGSLTFAEAVYVSSNPVFALVGAERL
GPEPFYRYIRAYGFGQPTGIDFPGEASGYVPVPGKVQHGEVLRWANVGFGQGVAVTPIQM
VSAAAAIANGGQLLRPQMVREVRGPDGSLERAFEPEPVRRVISPETAQTFVDIMRGVVTE
GSGAPAEMAGYPVAGKTGTAQIPEGGRYSDKAVASFLGIVPYDRPELVGLVMLYNLKVYP
RWGGTNAAPVFKAIMEPALEYLGVPRRFPPDQRPADNLVTVPNLRMSDGRAAVEELRQAG
LLVRAEGEGVYVMDQTPKPGSRVPRGSTVILHLISEPQPGQSLPVPDVRGMGMRDAVATL
AGVGFDIDPSGSGVAVSQAPAAGTAAPYGSVVKVRFEADRP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttgagggccgcctacacgcgcgcgcaggttcggcgcaggatcgccgtgcttttcctggtc
acgctggcgggagcgctgctcctggcggcgcggctcgtctacctgcagctcatccgcagc
gacgcgttccgggagcttgccctcgaccagcgcctgcgccccgtaccggtcctggcccag
cgggggaagatcgtggaccggcacgggagcccactggccgtctccgtcgcagccgattcg
gtgtacgcggtcccggtggaagtgcgggacgtcccggcgaccacccggcaactcgccgca
ctgctcaacctggacgcggcccgggtggaggggttgctccgccagcggtcggccagtgtc
tggatcgcccgcaaggttccgcccgagcaggccgaggccgttcgccgggccaggttgccc
ggcatctacctggtggagcggcctcagcgctactacccccacggttcactggcggcgcag
gtcctgggcatcgccggcatcgacaaccagggactcgaagggatcgagttcgcctacgac
gaggtgctgcggggggtaccgggtcgggatctagccgagcgcgacgcggccggccgggtc
attccccacggcgagcgggtctacctccccccggagccgggcaaggacgtggtccttgcc
atcgaccaggtcattcagtatatcgccgaacgggagatccaggcggcggtggagcggacc
aagagcgacttcggcctcttcgtggccatgaagcctgacacgggcgaagtggtcgccctg
gccctcagcccctccttcgacccgaacgcgtacggcggggcctccgccgagctccgccgg
aaccgggtggtaaccgaccagttcgaacccggctccatcttcaaggtcgtcacggccacc
gccgccttggatcagggcgtggtcaagcccgacgaccgcttcttcgacccgggctacgtg
gagatcggcggcggcatggtccgctcgtggcgccccggcggccacgggagcctcaccttc
gcggaggcggtctacgtctccagcaacccggtcttcgccctggttggggcggagcgcctg
ggtcccgagcccttctaccggtacatccgggcctacggcttcgggcagccgacgggcatc
gacttccccggcgaggcctcgggctacgtgcccgtgccgggcaaggtccagcacggcgag
gtgctccggtgggccaacgtgggcttcgggcagggcgtcgccgtcacgcccatccagatg
gtctccgccgccgctgccatcgcgaacggcgggcagctcctgcggccgcagatggtgcgg
gaggtgcgggggccggacgggagcctggagcgggcctttgaaccggagccggtgcgccgg
gtgatcagccccgagacggcgcagacgttcgtggacatcatgcggggcgtggtcaccgag
ggttcgggcgcgccggccgagatggcagggtaccctgtggccggcaagaccggtacggcc
cagattcccgagggcgggcggtacagcgacaaggccgtcgcctccttcctgggcatcgtg
ccctacgaccggccagagctcgtgggcctggtgatgctctacaatctgaaggtctacccc
cgctggggcggcaccaacgcggcgcccgtcttcaaggcgatcatggagccggccctcgag
tacctgggggtaccgcgccgcttcccgcccgatcagcgcccggccgacaacctggtgacc
gtccccaacctgcgcatgagcgatggccgcgcggccgtggaggagctgcggcaagcgggc
cttctggtccgggccgagggcgaaggggtgtacgtcatggaccagacccccaagccggga
tcccgggtgccccggggctccacggtcatcctccacctgatcagcgagccgcagccgggg
cagagcctccccgtgcctgacgtgcgaggcatgggcatgcgggacgcggtggccaccctg
gccggggtggggttcgacatcgacccctccggcagcggcgtggccgtctcccaggctccg
gcagccggcacggccgctccgtacgggagcgtggtgaaggtccgtttcgaggcggaccgg
ccgtga
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