Limnochorda pilosa: LIP_1911
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Entry
LIP_1911 CDS
T04150
Name
(GenBank) DeoR family transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
lpil
Limnochorda pilosa
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpil03000
]
LIP_1911
Transcription factors [BR:
lpil03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
LIP_1911
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_5
HTH_PafC
Fe_dep_repress
MarR
TrmB
HTH_24
HTH_IclR
MarR_2
HTH_20
FaeA
Put_DNA-bind_N
DprA_WH
DUF6477
DUF5817_CT
Rrf2
FeoC
DUF977
HTH_Cmi2_C
HTH_Crp_2
LexA_DNA_bind
PaaX
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BAS27752
UniProt:
A0A0K2SL79
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Position
complement(2017757..2018548)
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AA seq
263 aa
AA seq
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MLAAERRNRVLVQVRSRGKVQVNELSRELGVSAMTVRRDLAWLERSGLVQRTHGGALDPR
LLAEEVPLRRKSTRHPDEKRAIGRVAASLVEAGQTLVLDAGSTVLEAARALEARPLTVVT
NDLVTALELADRPGVTLYCTGGQVRPQVYSLQGSHAEAFLTGIQVHVAFLGADGVDPDLG
LFTTNLEKVAVKRAMIRAATRSYVLVDAAKLGTKGFARVAAVTEVMGVITTDRAPAPVVE
ALREKGLEVLLARASQVREGEAG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgctggcagctgaacggcgcaaccgggtgctcgtgcaggtacgtagccggggcaaggtg
caagtgaacgagctctcgcgcgagctgggcgtgtcggccatgaccgtgcggcgcgatctg
gcctggctggaacggtccgggctggttcagcggacccatggtggggccctggacccccgc
ctgctggcggaggaggtgcccctccgacgcaagtccacccggcatccggacgagaaacga
gccataggccgggtggcggcctcgctggtggaggcaggccagaccctggtcctcgacgcg
gggtcgacggtactggaggcggccagggccctggaggcgcgcccactgacggtggtcacc
aacgacctggtcaccgcgctggagctggcggaccgacccggggtgaccctctactgcacc
ggagggcaggtgcggccacaggtgtacagcctgcaggggtcccacgcggaggcgttcctt
accgggatccaagtacacgtggcctttctgggagccgacggagtcgaccccgacctgggt
ctcttcaccaccaacctggagaaggtggccgtcaagcgagccatgatccgggcggcgacc
cgcagctacgtcctggtggatgcagccaagctgggaaccaagggcttcgcccgggtagcg
gccgtgaccgaggtgatgggcgtcatcaccaccgaccgggccccggccccggtggtggag
gcgctgcgcgagaagggcctcgaggtgctgctggctcgagccagccaggtgagggagggg
gaggcgggatga
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