Limnochorda pilosa: LIP_1945
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Entry
LIP_1945 CDS
T04150
Name
(GenBank) hypothetical protein
KO
K15598
putative hydroxymethylpyrimidine transport system substrate-binding protein
K15599
putative hydroxymethylpyrimidine transport system permease protein
Organism
lpil
Limnochorda pilosa
Pathway
lpil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LIP_1945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpil02000
]
LIP_1945
Transporters [BR:
lpil02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative hydroxymethylpyrimidine transporter
LIP_1945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1
BPD_transp_1
NMT1_2
Phosphonate-bd
SBP_bac_11
DUF3418
Motif
Other DBs
NCBI-ProteinID:
BAS27786
UniProt:
A0A0K2SKZ1
LinkDB
All DBs
Position
complement(2054948..2056756)
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AA seq
602 aa
AA seq
DB search
MIRWRIHASRWAAPGLGLAAGLLAWEGGVRLWQVPPWLLPTPSEIGRELAASAALMLPHL
QVTLVEALLGLVLAVVVGLTLAIGIHVSPLLARVLEPWLVASQTVPVVALAPVLTVWFGY
TLLPKVLVVAILCFFPVVVNTVDGLRGTDPDYLRLMRTLRLGHWVTFREVELPNALPYFF
SGLRLAAAWSVVGAIFGEWVGTDEGMGYLMIRAISQFQTSRLFGAIALLSAAGFALFALT
RLVEYLSLPWLRSHEEASRHGSRPSGRHALLAVGVAGLLTVGFPGPLDLPHAEAASPSGA
PEKVDVILDWQPNADHVGIYAARAMGAFEDEGLQVALRVPADPSAALTQVAAGRSDLAIT
YAPELLQARSQGIPVVSVMELVQRPLNSVISLVEAGIRRPADLAGRTVGVPGTVDTDAIL
RSILVHDGVDPGQVRAINVGYDLIPALLSRRVDAIVGGFWNVEGVEVELLGFDPRVIHVE
EWGVPNNPALILATSEQTLARRGDVLRRFLRALSRGYETVVADPAQGARHLLDQNPDLDR
ELARRGIELLAPVLLDPATGRPGLHDLEEWRAFAAWMVEMGLLPGLVNVDEAVTNRLLDP
EG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgctggcggatccatgcctcccggtgggctgcacccggactgggcctggcggcg
ggcctcctggcctgggagggaggggtgcggctctggcaggtacccccgtggctcctgccc
accccatcggaaatcgggcgagagctggccgcgtcggctgcgctgatgctgccccacctc
caggtcacgctggtcgaggctctcctggggctggtcctggcggtggtggtgggcctgacc
ctcgcgatcggcatccacgtctcgcccctgctggcccgggtgctggagccctggctggtg
gcgtctcagacggtgccagttgtggcgctggcgccggtgctcaccgtctggttcggctac
accctgcttcccaaggtcctggtggtggccattctctgcttcttcccggtggtggtgaac
acggtggacgggctccgcgggaccgatccggattacctgcgcctgatgcgcaccctccgc
ctgggccactgggtcaccttccgggaagtcgagcttccgaacgccctgccctatttcttc
tcaggcctccgactggccgcagcctggagcgtggtgggggccatctttggtgagtgggtg
ggaaccgacgaagggatgggatacctgatgatccgtgcgatctcccagttccagaccagc
cggctcttcggggccatcgcgctcctctcggcggccgggttcgccttattcgcccttacc
cgcctggtggagtatctgagcctcccatggctccggagccatgaggaggcgtcgcggcac
ggcagccgtccgtcgggccgccatgcgcttctggcggtaggggtggcagggctcctgacg
gtcgggttccctgggcctctggacctgccacacgccgaggcggcctcgcccagcggcgcg
ccggagaaggtggacgtgatcctggactggcagcccaacgcggaccacgtgggcatctac
gccgcacgggccatgggagccttcgaggacgaaggcctgcaggtggccctgcgggtcccc
gcagacccttcggccgccctcacccaggtggccgcgggccggagcgacctggccatcacc
tacgcccccgaactcctgcaggcccgcagtcaggggatccctgtggtctcggtgatggag
ctggtgcaacggccgctcaactcggtgatcagcctggtcgaggcgggcatccggcgcccg
gcggacctggcgggccggaccgtcggagtgcctggaacggtcgacaccgatgccatcctg
agatcgatcctggtccacgatggagtggatcccggccaggtgcgtgccatcaacgtgggc
tacgacctgatcccggccttgctgagccgccgggtggatgccatcgtgggcggtttctgg
aacgtggagggagtggaggtggagctgctcggcttcgacccccgggtgatccacgtggag
gagtggggcgtgcccaacaacccggcgctgatcctggccaccagcgagcagaccctcgcc
cggcgcggtgacgtgctgcgccgcttcctgcgggccctctcccggggatacgagacggtg
gtcgccgatcccgcccagggtgcgcgccatctcctggaccagaaccccgacctggaccgg
gagctggcccgcagggggattgagctcctggccccggtgctcctcgacccggccacggga
cggcccggcctccacgacctggaggagtggcgggccttcgccgcctggatggtggagatg
gggctcctgccgggcctggtgaacgtggatgaggcggtcaccaaccggctgctcgacccg
gaaggctga
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