Limnochorda pilosa: LIP_2028
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Entry
LIP_2028 CDS
T04150
Name
(GenBank) transcriptional regulator
KO
K05346
deoxyribonucleoside regulator
Organism
lpil
Limnochorda pilosa
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpil03000
]
LIP_2028
Transcription factors [BR:
lpil03000
]
Prokaryotic type
Other transcription factors
Others
LIP_2028
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
HTH_24
HTH_Crp_2
HTH_23
Sigma70_r4_2
Sigma70_r4
HTH_3
HTH_38
HTH_IclR
HTH_31
HTH_29
HTH_28
HTH_11
HVO_A0261_N
TrmB
Cro
MarR
HTH_5
Fe_dep_repress
LacI
GntR
DUF7343
Crp
HTH_Tnp_4
HTH_36
HTH_ParB
HTH_10
Xre-like-HTH
TetR_N
Sigma70_ECF
HTH_37
HTH_17
HTH_AsnC-type
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
BAS27869
UniProt:
A0A0K2SM09
LinkDB
All DBs
Position
2140829..2141794
Genome browser
AA seq
321 aa
AA seq
DB search
MHICSCHGLTQLEIARRLGVSRPTISRLLQRARDIGLVRITISQGVENVTDLSNMLCRFF
DLKEAVVVPAAATIPDTLRQTVGHSAASYVQNLLRPGVTLAISWGITLYETVKAMRPEHV
PGMNVVQLVGGLGSTSPVLQSFDLARRVAELHDAECHPLHAPTREALMRDISVRRSLEMA
RTAQVALVGLDALWRHTSLVRVDGLGDREQRLLTEAGAAGECCFHFYTIDGIECDTVLSQ
QVMSLSLAELRALPLVVGVASDLDTVEAILGGLRTGVLDVLIVDQVAAERIITEEEDRRS
RLGKADGASKASTTADGSTGA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcacatatgttcctgccatgggttgacgcagctggagatcgctcgacggctgggtgtc
tcccgcccgaccatctcacgcctgcttcaaagggcccgggacatcggcctggtccgtatc
actatctcgcaaggcgtggagaacgtcacggacctctcgaacatgctctgccgcttcttt
gacctgaaggaggcggtggtcgtcccggccgccgccaccatcccggacacactccgccag
accgtggggcactctgcggcctcctacgtccagaacctgttgcggcccggcgtcactctg
gccatctcctggggcatcaccctctacgagaccgtcaaggccatgcggccggagcacgtg
cccggaatgaacgtggtccagctcgtgggcgggcttggctccacatcacccgtgctccag
tccttcgacctcgcccgacgggtcgcggagctgcacgacgccgagtgccaccctctccac
gcccctacccgcgaggcgctgatgcgggacatcagcgtgcggcgcagcctggagatggcc
cgtacggcacaggtagccctggttgggctggacgcgctctggcggcacacctctctggta
cgcgtcgacgggctgggggaccgtgagcaacgcctcctcaccgaggccggcgcagcaggc
gagtgctgctttcatttctacacgatcgacggcatcgaatgcgatacggtgctgagccag
caggtgatgagcctgagcttggcggagcttcgggcactcccgctggtggtgggggttgca
tccgatctggacaccgtggaggccattctgggcggcctgcgtactggcgtgctcgacgtc
ctcatcgtcgaccaagttgcggccgaacggatcatcaccgaggaagaggatcgacgctcc
cgcctcggcaaggcagatggagcctcaaaggcctcgacgaccgccgatgggagcaccggg
gcatga
DBGET
integrated database retrieval system
