Limnochorda pilosa: LIP_2593
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Entry
LIP_2593 CDS
T04150
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LIP_2593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpil03400
]
LIP_2593
Enzymes [BR:
lpil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LIP_2593
DNA repair and recombination proteins [BR:
lpil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LIP_2593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DraK_HK_N
Motif
Other DBs
NCBI-ProteinID:
BAS28423
UniProt:
A0A0K2SMR6
LinkDB
All DBs
Position
complement(2742631..2743926)
Genome browser
AA seq
431 aa
AA seq
DB search
MSQLTRVVKALLEGEPGLRRVAVRGELSNVTLHTSGHLYFTLKDVQASLRCVMFRGQAQH
LRFRPREGQDALALGSIGVYERNGQYQLYVDELVPAGEGQLYAEFQRLKEKLEREGLFDP
TRKRRLPRLPRRVGVVTSPAGAALRDVVTVLRRRFPAASILLSPALVQGAEAPDSLVRAL
GLLAAHGDVDVIIIGRGGGSLEDLWAFNDERVVRAIAASPVPIVSAVGHETDVTLADFAA
DVRAPTPSAAAELVAPDARELASQAARLERRLTQAVSQGLRARRERLRLLARSRVLSQPL
RPLQESRQRLDELTARLEAAFGRGVTDRRSALAHLAARLETLSPLGTLARGYAVATTPEG
RVVHQVGEAPVGSRLLVRVSDGSLGCRVEVQHPLPQGAEPPGRGREERARFRAPEEDRSG
SARRSGGAARG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgagccagctcacccgggtggtgaaggcgctcctggagggtgagcctgggctgcgccgg
gtagcggtgcggggcgagctctccaacgtgaccctccacacctcggggcacctctacttc
accctcaaggacgtccaggcctcgctccgctgtgtgatgttccgcggccaggcccagcac
cttcgcttccggccgcgggaagggcaggatgccctggccctgggctccatcggcgtctac
gaacggaacggccagtatcagctctacgtggacgagctggttcccgcgggcgaggggcag
ctctacgcggagttccagcggctgaaggagaagctggagcgggaagggctcttcgacccg
actcggaaacgacggttgccgcgcctgccccggcgggtgggggtggtcacctcccccgcg
ggagccgccctgcgcgacgtggtcacggtgctgcgccggcgcttccccgcggcgagcatc
ctgctctcccccgccctggtgcagggcgcggaggcccccgacagcttggtccgcgccctg
gggctcctggcggcccatggagacgtggacgtgatcatcatcggccgggggggcggctcc
ctggaagacctttgggccttcaacgacgagcgggtggttcgggccattgctgccagcccg
gtgcccatcgtctctgccgtgggtcacgagaccgacgtgaccttggcggacttcgcggcg
gacgtacgcgcccccaccccctccgcggccgcggagctggtcgctcccgatgcccgggag
ctggcctcccaggcggcgcgcctggagcggaggctcacccaggccgtctcccagggcctg
cgggcccggcgggagcggctgcggctgctggcccgctcgcgggtgctgagccagcctcta
cggccgctccaggagtcccgccagcggctggacgagctgaccgcgcggctcgaggccgcg
ttcggccggggggtgaccgatcggcgctcagccttggcccacctggctgcccgcctggag
acgctctcgcccctgggcaccttggcccggggctacgccgtggccacgacgcccgaggga
cgggtggtgcaccaggtgggggaggcccctgtggggagccgcctgctcgtgcgggtgagc
gacggttcgctgggctgccgggtggaggtccagcacccgctgccccagggtgcggagccg
cccgggcgcgggcgggaagaacgggcgcgattccgggcacccgaagaggaccgctcgggg
agtgcgcgtcggagcggaggtgcagctcgtggctga
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