Limnochorda pilosa: LIP_2814
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Entry
LIP_2814 CDS
T04150
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil03420
Nucleotide excision repair
lpil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LIP_2814
03430 Mismatch repair
LIP_2814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpil03400
]
LIP_2814
Enzymes [BR:
lpil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIP_2814
DNA repair and recombination proteins [BR:
lpil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LIP_2814
MMR (mismatch excision repair)
Other MMR factors
LIP_2814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAS28643
UniProt:
A0A0K2SND5
LinkDB
All DBs
Position
complement(2968359..2970509)
Genome browser
AA seq
716 aa
AA seq
DB search
MTDWLKELNPRQREAVEHGDGPLLVVAGAGSGKTRVLTYRIAYLIEVRGVPAHAILAVTF
TNKAANEMRQRIERLIGARAEQAWIGTFHATCVRMLRQSGRAIGLRPDFGIFDGSDQLVL
VRRVMKELNIDSKRYEPRSILGAISAAKNETTAPEAYAERASDPWERQVAKVYRLYQQGL
EEANALDFDDLLLQANRMLEESPEVLRRYQERFRHVLVDEYQDTNHAQYLLVNRLAAAHR
NLCVVGDADQSIYGWRGADVRNILEFERDYPDARVVLMEQNYRSTARILESANHVIANNL
DRPQKRLWTEHPEGDPVYVYQAVDERHEAAFVADAIELGHRRGRGYGEFTLLYRTHAQSR
AFEEEFVRRGLPYRIVAGLRFYDRKEIKDLLGYLRVLANPRDRVSLERIVNVPRRGIGEG
TLGRVEAFARTQVNELGQSMSLYEAMGQAGRVEGLSVQYRRRLAEFHALLEGLRAEAGRL
TVTDLVGRVLQESGYLEALQAEFGPDAESRIQNLQEFLTVTQQFDDQEGGQPGKLSEFLE
QVALVSDVDAYDSRSGSVTLMTLHAAKGLEFPVVFLVGLEEGVFPHSRAVWEPGEIEEER
RLAYVGMTRAQQVLVLTCARQRTLYGSTGFNPMSRFIEEIPEHLRQDVTTQGARGLLPGG
GRGRRRGGARWLRLCPEGTLPQARLRRPSGRASGCATATSAWAPWCEWSLRGATRR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgactggctcaaggagttgaacccgcgccagcgggaggcggtggagcacggggat
gggccgctcttggtcgtggccggggcgggatccggcaagacccgggtgctcacctaccgc
atcgcctacctcatcgaggtccggggcgtgcccgcccacgccatcctggccgtgaccttc
accaacaaggcggccaacgagatgcgccagcgcatcgagcggctcatcggcgcccgtgcg
gagcaggcgtggatcggcaccttccacgccacctgcgtgcgtatgctccgccagtcgggc
cgggccatcggcctccgccccgatttcggcatcttcgacggttcggaccagctcgtgctg
gtgcgccgggtcatgaaggagctgaacatcgactccaagcgctacgagccgcgctcgatc
ctgggcgccatcagcgccgccaagaacgagacgacggcgcccgaggcatacgcggagcgg
gcgtcggacccctgggagaggcaggtggcgaaggtctaccgtctctaccagcaggggctg
gaggaggcgaacgcgctcgacttcgacgacctcctcctccaggcgaaccggatgctggag
gagtcccccgaggtgctccgccgctaccaggagcgcttccgccacgtcctggtggacgag
taccaggacaccaaccacgcgcagtacctgctggtgaaccggctggccgccgcgcaccgg
aacctgtgcgtggtgggcgacgcggaccagtccatctacggctggcggggcgccgacgtc
cgcaacatcctggagttcgagcgggactaccccgacgcccgggtggtcctgatggagcag
aactaccgctccacggcccgcatcctcgaatcggccaaccacgtcatcgccaacaacctg
gacaggccccagaagcggctctggaccgagcaccccgagggcgaccccgtgtacgtctac
caggccgtggacgagcgccacgaggccgccttcgtcgcggacgcgatcgagctcgggcac
cggcgggggcgcgggtacggggagttcaccctgctctaccgcacccacgcccagtcgcgc
gccttcgaggaggagttcgtgcggcgggggctcccgtaccggatcgtggcgggcctgcgc
ttctacgaccggaaggagatcaaggacctgctgggctacctgcgggtgctggccaacccc
cgggaccgggtgagcctggagcggatcgtgaacgtgccccggcggggcatcggcgagggg
accctgggccgggtggaggccttcgcccgtacccaggtgaacgagctgggccagtccatg
agcctctacgaggccatggggcaggcggggcgggtggagggcctgtcggtgcagtaccgc
cgccgcctggccgagttccacgcgctcctggaggggctccgggccgaggcgggccggctc
accgtcacggacctggtgggccgggtgctgcaggagtcggggtacctggaggcgctccag
gccgagttcgggcccgacgcggagagccgcatccagaacctgcaggagttcctcacggtg
acccagcagttcgacgaccaggaaggcggccagccggggaagctttcggagttcctggag
caggtggcgctggtctcggacgtggacgcctacgatagccggagcgggagcgtcaccctc
atgaccctccacgcggccaagggcctggagttccccgtggtcttcctggtgggcctggag
gaaggggtcttcccccacagccgggccgtgtgggagccgggggagatcgaggaggagcgg
cgcctggcctacgtgggcatgacgcgggcgcagcaggtgctggtgctcacatgcgccagg
cagcgcacgctctacgggtccacgggcttcaaccccatgagccgcttcattgaagagatc
cccgagcatctccgccaggacgtgaccacccagggggcccgggggctgctgcccggcggc
gggcgggggaggcgccgggggggcgcgaggtggctgcggctctgtccggagggcaccctc
ccgcaggcgagactgaggaggccttccggccgggccagcgggtgcgccaccgccacttcg
gcgtgggcaccgtggtgcgagtggagcctgcggggcgcgacgagaaggtga
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