Limnochorda pilosa: LIP_3342
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Entry
LIP_3342 CDS
T04150
Name
(GenBank) helicase SNF2
Organism
lpil
Limnochorda pilosa
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
AAA_34
Motif
Other DBs
NCBI-ProteinID:
BAS29154
UniProt:
A0A0K2SQT0
LinkDB
All DBs
Position
complement(3507248..3510406)
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AA seq
1052 aa
AA seq
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MIVVHAGAIQGRLALWAERSLDGSPPPKPRRGRPPRDPHPLPYPYDAGREGLQAAVSAAA
ASIRVGSRRLDGLILRSPSAGGLPIPSSSLIGEPPASRAPTRILPWRVTAVLLSPGEAVR
LLLACSGQRTLAPGIAVGEDLAFWAALLRVAGDLVARGRFLPDLVGEEETFAARWQPVLQ
GSDQERLHALARAMPAVARALSNSPAEDAVGEVLAGFVDHLVRSGLQERAADSAQERAAD
GAAAKRRASRAETPHELWLRALLAPDGRLAGSRDALEPLAAEVREWRRPVEELAGAPFRL
CFRLEEPPAPEETGDGEPPAAAEPEQPWRLRYLLQPVPDPSLLVPMEQVWPARSRQARLL
AAHGSDPRRYALTALGQAARLVPDVEAGLRQPRPAGCALDATGAYRFLTEHALALEEAGF
RVMLPAWWTRGRARARLNLRGRVSGAGSGRSARNGFTLESLVRFDWQAALGDEPLTREEL
EQLARLKVPLVRLRGRWVQVDGAQIRQVLRFVQEHSGERRPAREVLRAGLGGAAGPGGVP
VDGVQATGWIGRLLHQVQERTALEELDPPRGFQGTLRPYQMRGYAWLHFLRRWGLGACLA
DDMGLGKTIQTLALVQHEREAGETRPVLLVCPTTVLGNWQREASRFTPGLPVMVHHGPER
QRGEAFGEAAAGSGLVLTSYALLQKDQALLKTVEWAGVVLDEAQNVKNPETKQARAARSL
PAEYRVALTGTPVENHVGDLWSLMEFLNPGLLGSQADFQRRFFLPIQTRQDPEAAARLKQ
LTGPFILRRVKTDRSIIADLPEKLEMKVFAPLTREQATLYQAVVQEAEEALEASEGMSRR
GLVLATLSKLKQVCNHPAQFLQDGSAIEGRSGKLTRLAEMLEEILETGERSLIFTQFAEM
GQILRRHLQERFGREVLFLHGAVPKPQRDRMVRRFQEEDDGPPVFVLSLKAGGTGINLTR
ANHVFHFDRWWNPAVESQATDRAFRIGQERRVEVHAFVCAGTLEERIDRMIEQKRWVAGQ
VVGTSEAWLTELSNHELRELFALRVEEAVRET
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgtccatgcgggcgccatccagggccgtctggccctttgggcggagcggtcc
ctcgacggatcgccccctcctaagccccggaggggcaggccccctcgggacccgcaccct
ctcccgtacccttacgatgcagggcgtgaagggctccaggccgcggtgtcggcggccgca
gcaagcatccgtgtgggaagccggcgcctcgacggactgatcctgcgctccccgtccgcg
ggcggcctgcccatcccctcgagctccctcatcggcgagccgcccgcctccagggccccg
acccgcatcctgccctggcgggtcacggccgttctcctgtcgcctggcgaggcggtccgc
ctcctcttggcctgctcaggccagcgcacccttgccccgggcatcgcggtgggtgaggac
ctggccttctgggcagcgctcctgcgggtggccggtgacctggtggcgcggggccggttc
ctgccggacctggtgggggaagaggagaccttcgcggcccggtggcagccggttctgcag
ggatccgaccaggagcgcctccacgccctcgcccgcgccatgccggcggtggcccgggcc
ctctccaactcgccggccgaggacgcggtcggggaggtcctcgcagggttcgtggaccac
ctggtgcgctccggcctgcaggagcgggccgcggacagcgcacaggaaagggccgcggat
ggcgcggcagccaaacgtcgtgcgtcccgggccgagacgccccacgagctctggctccga
gcgctcctggcacccgacggccggctggcgggcagccgggacgcgctcgaacctctggcc
gcggaggtgcgggagtggcggcgcccggtggaagagctggccggcgcgccctttcggctc
tgcttccgcctggaggagccgcctgcccccgaggagaccggcgacggcgaaccgcctgcc
gcagcggagcccgagcagccctggcgcctgcgctacctcctccagcccgtgcccgaccca
agcctcctggtgcccatggagcaggtctggccggcccggtcccggcaagcgaggctcttg
gcggcccatggttcggacccgcgccgctatgccctcacggccctggggcaggcggcccgg
ctcgtgccggacgtggaagcaggcctcaggcagccgcggccggcgggctgcgccctggat
gcgaccggcgcttaccgcttcctgacggagcatgccctcgcgctggaggaggctgggttc
cgggtgatgctgcccgcctggtggaccaggggcagggcccgggcacggctgaacctgcgg
gggagggtgtcgggcgccggctccggacggtccgcccgcaacgggttcaccctggaaagc
ctggtccgcttcgactggcaggcagctttgggagacgagcccctcacccgcgaggagttg
gagcagctggcccgcctcaaggtcccgctggttcggctgcgggggcggtgggtccaggtg
gacggggcccagatccgccaggtgctccggttcgtccaggagcactcgggcgagcggcgc
cccgcgcgggaggtgctccgggccggcctggggggtgctgccggtcccggcggggtgccc
gtggacggggtgcaggccaccggatggatcgggcggctcctgcaccaggtccaggagagg
accgccctggaggagctcgacccgccccggggcttccagggcaccctccgcccttaccag
atgcggggatacgcctggctccacttcctccggcgctgggggctgggagcctgcctggcg
gacgacatggggctgggcaagacgatccagaccctggccctcgtgcaacacgagcgggag
gccggggagacgcggcccgtgctcctggtctgccccaccacggtgctgggcaactggcag
cgcgaggcgtcccgtttcacgcccggcctgccggtgatggtccaccacggacccgagcgg
cagcggggggaggccttcggggaggccgcggcgggcagcgggctcgtcctcaccagctac
gcgctgctgcagaaggaccaggccctgctgaagacggtggagtgggccggtgtggtgctg
gacgaagctcagaacgtgaagaaccccgaaaccaagcaggcccgggcggctcgctccctc
ccggccgagtaccgggtggcgctcaccggtacgcccgtggagaaccacgtgggcgacctc
tggtccctcatggagttcctcaatcccggcctcctgggcagccaggccgacttccagcgc
cggttcttcctccccatccagacccggcaggatcctgaggcggccgcacggctgaagcag
ctcacggggcccttcatccttcggcgggtgaagacggatcgcagcatcatcgccgacctc
cccgagaagctggagatgaaggtcttcgccccgctcacccgggagcaggcgaccctgtac
caggcggtggtgcaggaggccgaggaggccctggaggcttcggagggcatgagccggcgg
gggctggtgctggccacgctgtcgaagctgaagcaggtgtgcaaccacccggcccagttc
ctccaggacggctctgccatcgagggccggtcgggcaagctgacccgcctcgcggagatg
ctcgaggagatcctggaaaccggtgagcggtccctgatcttcacccagttcgccgagatg
ggccagatcctccgtcgccacctccaggagcggttcggccgggaggtgctcttcctccac
ggggccgtgcccaagccccagcgggaccggatggtgcggcggttccaggaggaggacgac
ggcccgcccgtcttcgtcctttccctgaaggccggtggcaccgggatcaacctgacccgg
gcgaaccacgtcttccacttcgaccgctggtggaaccctgccgtggagagccaggcgacg
gaccgggctttccgcatcggccaggagcggcgggtggaggttcacgccttcgtctgcgcc
ggcaccctggaggagaggatcgatcggatgatcgagcagaagcggtgggtggccggccag
gtggtgggtacgagcgaggcatggctgaccgagctctccaaccatgagctgagggagctc
ttcgccctccgggtggaggaggcggtgcgcgagacatga
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