Limnochorda pilosa: LIP_3551
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Entry
LIP_3551 CDS
T04150
Name
(GenBank) hypothetical protein
Organism
lpil
Limnochorda pilosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K319L-like_PKD
PKD_4
PKD
Big_9
Sde0182_C
REJ
NosD
Beta_helix
Cadherin_5
CHU_C
PQQ
Motif
Other DBs
NCBI-ProteinID:
BAS29362
UniProt:
A0A0K2SQS8
LinkDB
All DBs
Position
3716157..3722282
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AA seq
2041 aa
AA seq
DB search
MKQRSGWQATRASRSLASGLIIGLLCTLAPWVALAATFTVDSLADSHDHTPGDGSCADQS
GACTLRAAIEDASTNGEPDTILFAIDGVISLVLGPIELLEGATTIAGADGRVTVDGSGNP
QDTDNFLIRSDDNVIRGLMVQNARRDGIRIEGARNIIGGSEPGHRNVISLNSSAGIHIDG
AGALDNVISGNYIGTDPTGRFARGNAYYGIYVLRGEHTIIGGDTPSERNLISGNGEYGIY
ILEANNNVVSGNYVGTAIDGEVAIGNSIGVSIGGWSTGNVVGGDTPAERNLVSGNGKGIE
IGQPGAADNVVIGNLIGTDVSGTRALGNSTGVVIVSGATSNTIGGTSASVRNVISGNVSS
GVQIVSSGTTGNAVIGNYIGTDISGTVALGNGRDGVSLEYGTHDNIVGGENPGAGNVIAS
NQGAGVRLLQSTSNVVAGNRIGTDANGSKALGNGHGILLESAAAANVIGGDTPESGNLIA
FNGTGITMTGSSTRFNKIRYNSMRENSGPGIVISNGAQDGISPPTIHSADLTMVVGTAAS
GGMTIDLYLADGDPSGAGEGETFVTTGVTGENGDFAIPVSGLSADDVLTATATDASGNTS
AFALNVEVNVPPVAQAGPDQLVLVGQAMQLDGSGSHDPDGDSLSYSWSFVSKPPSSGAAL
ADPFAQAPTFVPDVAGEYRVELVVDDGHGETDRDEVTVTANTPPVADVGPDQRVLPGTTV
QLEGSGSTDPDGDPLAYGWEFVFRPAGSEAVLAGASTPTASFVADVAGVYTVRLTVDDGR
GGTAQDEVTITANTPPVANAGPGRIVLLGSTVQLDGSGSHDPDGDQLSYRWTLVSAPSGS
SAALSDPALPAPTFDADVAGAYVLELVVTDSRDETGVDQVTITANTRPLADAGLDQRVLP
GTTVHLDGSGSSDPDGDPLVYEWGFVSRPLGSEAALAGASTSTASFVADTAGVYAVRLTV
EDGRGANDQDEVTITANTPPLANAGPDQVVPLGATVQLDASGSFDADGDDLMHNWSLIDM
PDGSSATLSDPALRAPTFIADLPGEYRIELTVSDGAEANVDVVVVTGNAPPVANAGVDQE
VLVGNTVLLDGTGSSDPEGDALSYSWYFVSKPPNSNAALSDDATGTPSFVPDVGGEYVVA
VGVSDGISDSEPDTVTIAANSRPVARPGEDRVVLVGSSVEMDGSASFDPDGDPLTYEWSL
LSKPSASGAALEGENTPTPAVVVDIAGTYVVRLTVDDQRGGTGSAEVAILANTAPIAAAG
TDQSVSVGDAVQLDASGSLDADADILAYVWSFLSKPTSSGATLLNPNAATASFLSDVAGQ
YHLQVLVTDIHGATGSDEVVITANTAPVANAGPDQLVPVGTTVQLDASGSFDSDGDNLVY
EWSLSGMPDSSSAVLSDPALPSPTFVVDVPGQYQADLVVSDGRESSFDSTIVVGNAAPVA
SAGAAQVVPVGKIVRLDGTGSDDPEGDELAYSWRFVFLPAGSNASLAGADTDAPSFTPDV
AGEYVLELVVSDGLSESPPDRVTVTGNGRPVADVGPDQEVLLGAKVTLNGAGSTDPEGEP
LAYAWGLTARPAGSEAALTGGSTPVATLVPDRPGTYEVTLTVADPWGGTDAATVAILARA
RPVTTFDHAPATDLTTASVIAFADSSSDEDGEIVGWEWEFGDGATSNLQNPSHQYAAPGI
YHVSLVVTDDDDLSSNPVRATLAVGTPGAPVEGVLSEQAPSGDYTMDASALGGITLVKSG
PGTPLMTVASYGGNPVAAGVKLFAGEGSYFDVNLDSGEGVDAVELSWVAGSDVDPSDLHL
MWHDEPARTWKLVSPQQVSAGTSGVVRVVARLDGASSPTVAQLTGTIFAGGANAPPEVTI
LAPEAGAMWEGDKIIRWAAADPDGDDGAVTIDLAYTSAGGNWVSIAAGVANVGEHEWDTS
VVPAGGIYRVRVTATDALGGSGEATSEPFTVVKIAGHVAHGPNPSSDSVTFYFAGGAAGR
LYVYDAAGRLVWQARVPEGLPSLQWDLRSTQGAMLGNGLYLYLLQLDDGTRSEVRRLVIE
R
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcagcgctcaggctggcaggcaactcgcgcgtccaggtctcttgcaagcggtctg
atcatcggcctcctctgcacgctggccccatgggtggctctggccgccactttcaccgtg
gactcactcgcggacagccacgatcatacgcccggcgacgggtcatgcgccgatcagtca
ggcgcgtgcacgcttcgggcggccatcgaagacgcgagcaccaacggggagcccgacacc
atcctcttcgccatcgacggggtcattagcctcgtcctcggccccattgagcttctggaa
ggcgcgacgaccatcgcaggggcggacggtcgcgtcacggtcgacgggtccgggaatccg
caggatacggataacttcctgattcgctcggacgacaacgtgatccgagggcttatggtc
cagaatgcgcggcgagacggcatacgcatcgaaggcgcgcgcaacatcatcggcggcagc
gagcccgggcaccgaaacgtcatcagcctcaactcaagcgcaggaatccacattgatggt
gctggcgcgctcgacaacgtgatcagcggtaactacattgggacggatccaacggggagg
ttcgcgcgaggcaacgcctactacggcatctatgtgctccgtggtgagcacaccatcatt
ggcggcgataccccatcagagcggaatcttatctcgggcaatggggagtacgggatctac
atccttgaagcgaacaacaacgtagttagcggcaattacgtagggacggcgattgatggt
gaagtcgccataggtaatagtataggcgtctctatcgggggctggtcgacaggcaacgtg
gttggcggcgacacgcctgcagagcggaaccttgtctcgggaaacgggaaaggaatcgag
atcgggcaacctggagctgctgataatgtggtgatcggtaaccttataggcacggacgtg
agcgggacacgtgcgctcggcaactctactggtgtggtcatcgtatccggcgcgacgtcc
aacacaattggaggtacgtcggccagcgtccgtaacgtgatctcgggcaacgtctcgagc
ggagtacagatcgtgagcagcggcacgactggtaacgctgtcatcgggaactacatcgga
accgacatctcgggcactgtggccctgggcaacggccgtgacggtgtttctctggaatac
ggcactcacgacaacattgtcggtggggagaacccaggggcgggtaacgtcatcgcgtcc
aaccaaggggctggcgtgcggctactccagtccacgagcaacgtcgtcgcaggcaaccgc
atcggtaccgacgcgaacggctccaaggcacttggcaacggccatgggatcctgcttgaa
agcgctgccgcagccaacgtcataggtggagatacgcctgagtccggcaatctcatcgcc
tttaacggaaccggcatcaccatgacggggtcaagtaccaggttcaacaagatccgctat
aacagcatgcgggagaactcggggccgggcatcgtgatttccaatggtgctcaggatggc
atatcaccgccaacgattcatagcgccgatctcacgatggtcgtcggcacggccgcctcg
ggtgggatgaccattgatctctacctcgccgacggcgacccttcaggtgccggtgagggc
gagacattcgtgacaacaggcgtaactggcgagaacggcgacttcgccattcccgtttcg
ggcctgtcagcagacgatgtactgacggctaccgcgaccgacgcctcgggcaatacttcg
gccttcgccctcaacgtggaagtcaacgtccctcccgtggcccaggctggtccagatcaa
cttgtactggttggccaagcaatgcagcttgacggatcggggtcccatgacccggacggc
gattcgctctcgtattcctggtctttcgtttcgaagcctccttccagcggggctgccctg
gccgaccccttcgcgcaggcgccgactttcgtccccgatgtcgcaggagagtaccgggtg
gagttggtcgtggacgacggccacggagaaactgaccgagatgaggtgaccgtcaccgcc
aacactccgccggtggcggatgtggggcctgatcagcgtgtgctgccggggacaacggtg
cagctcgaggggtctggctccactgacccagacggggaccccctcgcctacgggtgggag
ttcgtcttcaggccagcgggaagcgaggcggtgctggctggcgcgagtacgcccacggcc
agcttcgtggccgatgtggcgggagtttacaccgtccggctgacggtggacgacgggcgt
ggagggactgcccaggacgaggtcaccatcaccgccaacacgccgcccgtagcgaacgcg
gggccgggccgtatcgtgctcttgggttccaccgtacagcttgacggctcagggtcacat
gatcctgacggggaccagctgagctaccgctggactctggtatcggccccgagcggaagc
tccgctgccttgtccgacccggccttgccagcgccgaccttcgacgccgatgtggctggg
gcttacgtactggaactggttgtgacggacagcagggacgagacgggcgtggatcaggtg
accatcacggccaacacccggccactggccgatgcaggattggaccagcgagttctgcca
ggaacaacggtccatctcgacggatccggctccagtgaccccgacggggatccgctggtt
tatgaatgggggttcgtctccagacccttggggagtgaggcggcgctcgctggcgcctcg
acctccacggccagcttcgtggccgatacggcaggggtctatgccgtgcggctgaccgta
gaggacggtcggggcgcgaacgaccaggacgaggtcaccatcaccgccaacacgccgccc
ctggcgaacgcagggccagaccaggtcgtcccgctgggcgcgaccgtacaactggacgcc
tctggctccttcgacgctgacggggatgacctcatgcacaactggagcctaatcgacatg
cccgatggcagtagcgcaacgctttccgatcccgcgctccgtgccccgacatttatcgcg
gacctcccaggcgagtatcggatcgagttgactgtcagcgacggagccgaagcgaatgtc
gatgtggtcgttgttacaggcaacgctcccccagtcgccaacgcgggagttgatcaagag
gttctcgtaggcaacaccgtcctcctcgacggcacggggtcctcggatcccgagggcgac
gcgctgtcctactcgtggtactttgtttccaagccacccaacagcaacgctgcactttcc
gacgatgctacgggaacacccagttttgtccccgacgttggaggtgagtacgtcgtagca
gtcggagttagtgatggaatcagcgacagtgagcccgacacggtcacaatagcggcgaat
tcccgaccggtagcccgtccaggtgaagaccgagtggtgctggtgggttcaagcgttgag
atggacggatcagcgtccttcgatcctgacggtgacccgctcacgtatgaatggtcgttg
ctgtcgaagccctccgccagtggcgccgccctggaaggggaaaacacgccgacccccgcc
gtcgtggttgatatcgcaggtacctacgtggtccggttgaccgttgatgaccagagaggt
ggcacaggctccgccgaggtagcgatcctcgccaacaccgcacccatcgccgctgccgga
acagaccagtcggtgagtgtaggtgatgccgtgcaactcgatgcctccggctcgctcgat
gcggacgctgatatcctggcgtacgtgtggtcgtttctttctaagccgacatccagcggt
gccaccctgctcaatccgaatgcagcgacggcctccttcctttcggacgtcgccggtcaa
taccatcttcaggtgctggtcacggacatccacggggctacaggctctgatgaggtagtg
attaccgccaacaccgcacccgtcgccaatgccggtccagaccaacttgtacctgtgggg
acaaccgtgcagctggacgcttccggctccttcgattcggacggagacaacctcgtgtac
gaatggagcctatcgggcatgcccgatagcagtagcgcagtgctctccgatcccgctctc
ccctcccccactttcgtcgtggacgtccccggccagtatcaggcagatcttgttgtcagt
gacgggcgagagtcgagcttcgactcgactatcgtcgtgggaaacgccgcccccgtcgcg
agtgccggggcggctcaagtcgtccccgtggggaaaatagtccgccttgacggcaccggc
tccgacgaccccgaaggcgatgagctggcctactcctggcgcttcgtgttcctccccgcc
ggaagcaacgcttcgctcgctggagcggatacggacgctccaagcttcacccccgacgtc
gccggggagtatgtactggaactggttgtgagcgatgggctgagtgagagccctcccgat
cgcgttaccgtcactgggaacggccgcccggttgccgatgtgggacccgatcaggaggtg
ctgctgggggcaaaagtaaccctcaacggtgcaggctcaaccgacccagaaggagagccg
ctggcgtatgcgtggggcctgaccgcacgcccggcaggtagcgaggcggcgctgaccgga
ggctccactccagtggcgaccctcgtgcccgaccgccctggaacctacgaggtcaccctc
acggtcgccgatccatggggcggcacggatgcagcgaccgtagcgatcctagcccgtgcc
aggccggtcaccacattcgaccatgcacccgcaacggatctcacgaccgccagcgtcatc
gcgttcgcagactcctccagtgacgaggacggggaaatcgtgggctgggagtgggagttc
ggcgacggtgcgaccagcaatctccagaacccctcccaccagtacgccgcgccaggaatc
taccacgtgtcgctcgtcgtgacggatgatgatgacctctcaagtaacccggtgcgcgcc
acgctcgctgtcgggacgcccggcgcgcccgttgagggcgtattgagcgagcaagcgccc
tcgggggactacaccatggatgcctcggccctgggtggcatcacgttggtgaagtccggg
cctggtacccccctgatgactgtcgccagctacggcggcaatccagttgccgcaggggtg
aagcttttcgcaggagagggaagctacttcgacgtcaacctcgactcaggcgagggtgtc
gatgccgtcgaactctcctgggtggccgggagcgacgtcgatccgagcgacttgcacctg
atgtggcacgacgagcccgcccgtacgtggaagctcgtttctccccagcaggtgtctgcg
ggcacgagcggagtcgtacgggtcgtcgcccgtctcgacggggcttcctccccgacggtg
gcccagcttaccgggacgatcttcgcgggcggggccaacgcgccaccggaggtaacgatc
ctggcgccagaggccggggcaatgtgggaaggcgacaagatcatccgctgggctgccgcc
gaccccgacggggacgatggcgcggtgacgatcgacctcgcctatacctcggcgggcggc
aactgggtctccatcgcagcaggcgtggcgaacgtcggggagcacgagtgggatacttcg
gtggttccggcgggcgggatctaccgcgtgcgggtcaccgcgacggacgcgctcggcggc
tcgggtgaggccaccagcgagccgttcaccgtcgtgaagattgccgggcacgtggcccac
gggccgaaccccagctccgacagcgtgaccttctacttcgctggcggggccgccggtagg
ctctacgtctacgatgcggcggggaggctggtctggcaggccagggttccggaaggtcta
ccgtctctccagtgggacctgcgcagcacccagggagcgatgctcggcaacgggctgtac
ctctacctgcttcagctggatgacggcacccgctccgaggtgagaaggctggtgatagaa
cgttga
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