Lactiplantibacillus plantarum JDM1: JDM1_0329
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Entry
JDM1_0329 CDS
T00946
Symbol
choS
Name
(GenBank) glycine betaine/carnitine/choline ABC transporter, substrate binding and permease protein
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JDM1_0329 (choS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpj02000
]
JDM1_0329 (choS)
Transporters [BR:
lpj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
JDM1_0329 (choS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACT61218
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All DBs
Position
344141..345667
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AA seq
508 aa
AA seq
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MQTLIQTFMDRRGDLLTALWQHLGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSV
LQTIPSLALLGLLIPLVGIGTVPAVIALVIYALLPIFQNTYLGISEIDASIEEAADAFGM
SRMRKLFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAGGLGTFIMLGIDRNDTSLL
LIGAISSALLAILLSALVRWFQTAKPRHALIVFVGILALLGGGGAYSVYANRVETITIAG
KLGSEPEILINMYKQLIEAEDEHVHVTLKPNFGKTTFLFSALKNNQVDIYPEFTGSVLET
LVKGNNPAGQTANQTYQLAKQRLAKQEQMTYLKPMQYNNTYALAVTKKFQQEHHLKTISD
LTQVESILKPGMTLEFIDRNDGLKGIKKTYGLDVTAKSMEPALRYEAISKGKINLVDAYA
TDSELRQYHLALLKDNKHFFPTYQGAPLMKTSFANKHPKVVKALNKLAGKISETDMQEMN
YEVNVKKQSASTVAHRYLVKHGLLKEGR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcagacattaatacagacgtttatggatcgacgcggggatttgctgactgcgctatgg
caacacttggggatttcattagcatcattagtcatcgcaatggtaattgcgattccgttg
gctatttgggtcgttcgacgaccacggtgggccgagggattgttacaactcacgagtgtc
ttacagacgattccgtctttggcactgttagggttattgattccgttagttgggattgga
acggtgccagcagtaattgcgctggtgatctatgctttactgccaatttttcaaaatact
tatttgggtatctcagaaattgacgcctcaattgaagaggccgccgatgcctttgggatg
tcacgaatgcgtaagttgtttaaagttgaactacccattgccctaccacagatcattgct
gggattcggaccgcgctcgtcttaattattgggacggctactttggccgctttgattggt
gctgggggtctcgggacctttatcatgctcggtattgaccgtaatgatacctcgttatta
ttgattggggctatctcatcagcattgttagcaattctgctgagtgcgctcgttcggtgg
tttcaaacggctaaaccacgccacgccttaatcgtctttgtcggtattttagctttacta
ggtggtggcggggcttatagtgtttatgccaatcgagttgaaacaattacgattgcaggt
aaactcggttccgaaccagaaatcttgattaatatgtataagcagctgattgaagctgaa
gatgagcatgttcatgtgacgctcaagcctaactttggcaagaccacgttcttattcagc
gcgttaaagaataatcaggttgatatttatcctgaatttactggctcggtgctggagacc
ttagttaagggaaataacccagctggtcaaacagctaaccagacctatcagctcgccaaa
cagcgcctcgctaaacaggaacaaatgacttacttgaagccgatgcagtataacaatacg
tacgcattggcagtgactaagaaatttcaacaagaacatcatttgaagacaatcagcgac
ttaacgcaagttgaatcgattctgaaacccggaatgaccctagagtttattgatcgtaat
gatggcttaaaaggaatcaagaagacttatgggttagacgtgactgccaagtcgatggag
ccggcgctacgctatgaagccatcagtaaggggaaaatcaacttggtagatgcctatgcg
acggatagtgaattacggcagtatcacttggccttattgaaggataacaagcacttcttc
ccaacgtatcaaggggcaccgttgatgaagacgagctttgccaacaaacatcctaaggtc
gttaaagcgttgaataagttagcaggaaagatttcagaaactgatatgcaagaaatgaac
tatgaagtcaatgttaagaagcagtccgcttcgacggttgcacatcgctatcttgtgaag
cacggtttattgaaggagggacgttaa
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