Lactiplantibacillus plantarum JDM1: JDM1_0406
Help
Entry
JDM1_0406 CDS
T00946
Symbol
serS1
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JDM1_0406 (serS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpj01007
]
JDM1_0406 (serS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpj03016
]
JDM1_0406 (serS1)
Enzymes [BR:
lpj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
JDM1_0406 (serS1)
Amino acid related enzymes [BR:
lpj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JDM1_0406 (serS1)
Transfer RNA biogenesis [BR:
lpj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JDM1_0406 (serS1)
Prokaryotic type
JDM1_0406 (serS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
BLOC1_2
Wtap
WipA_N
Motif
Other DBs
NCBI-ProteinID:
ACT61295
LinkDB
All DBs
Position
429086..430357
Genome browser
AA seq
423 aa
AA seq
DB search
MLNPKFVRNNPELVKTKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQIG
QSDPQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDEDS
NVEMRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVYSF
MLDLHTQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMTLIPTAEVPLTNYY
ANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDELE
KLTDNAEEVLHELGLAYHVIKLSTGDTGFSSAKTYDVEVWMPEQGVYREISSCSNCLDFQ
ARRAMIRYRKSDGTVDYVHTLNGSGLAVGRTVAAILENYQQADGTVKIPKVLQPYMHGMT
EIK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatccaaagtttgttcgtaataacccagaacttgttaagactaagctccagact
cggaaggttgatccggctgaggttgatgaatacttacagttagaccaacaaaaccgggat
gcaattaccaaggttgaaggattgaagaaacagaaaaaccagttgacggaacaaattggg
caaagtgatccgcaatcggaagcgggccaagccctcattcaacaagtcaaacagctgaat
ggtgatattaagagtacggaagcggcccaaacggaagtaaacgatcggcttcattactta
gcgattcgcttcccgaatttacctgccgatgatgtaccagtcggtcctgacgaagatagc
aatgttgagatgcgtaagcacggcgatattccaacgtttgattttaaacctaaggcgcac
tgggaattgggcgaaagcttaggaatcttggattttgaccgggcagcaaaagtcgcgggc
gcgcgctttgtttattataaggatgcgggtgcactcttagaacgggcggtttacagcttt
atgctagatctgcacacacaaaagcaagggtaccatgaaattattccgccatacttggtg
aacgctcagacaatgtatggaactgggcaatttccgaagttcaaagaagacgtctacacg
gttgaatcttcaggaatgacgttgatcccgacggctgaagtaccgctgaccaattactat
gcgaatgaaatcttatctgaagatcaattgccaacgtacttcacggcgatgacgccttgt
tatcgctccgaagctgggagtgcggggcgtgatacccggggcttgattcgtatgcaccaa
tttcacaaagtcgagatggtcaagtactgtaaacctgagaattcatacgatgagctcgaa
aaattaacggataatgccgaagaagtgttgcacgaattagggcttgcataccatgttatt
aagctttcaacgggggatactggtttctcatcagccaagacctatgatgtggaagtatgg
atgccagaacaaggcgtttatcgggaaatcagttcatgctctaactgcttggacttccaa
gcacggcgggcgatgattcgttaccggaaatctgatgggacggtcgattacgtccatacg
ttgaatggttctggacttgctgttggccggacggtagctgcgattttggaaaattatcaa
caagccgatggcacggttaagattcctaaggtgctccaaccttacatgcatggtatgaca
gagataaaataa
DBGET
integrated database retrieval system
