Lactiplantibacillus plantarum JDM1: JDM1_0426
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Entry
JDM1_0426 CDS
T00946
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj00220
Arginine biosynthesis
lpj00240
Pyrimidine metabolism
lpj00250
Alanine, aspartate and glutamate metabolism
lpj01100
Metabolic pathways
lpj01110
Biosynthesis of secondary metabolites
lpj01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JDM1_0426 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JDM1_0426 (carB)
00220 Arginine biosynthesis
JDM1_0426 (carB)
Enzymes [BR:
lpj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JDM1_0426 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
Dala_Dala_lig_C
ATP-grasp_3
CPSase_L_D3
ATP-grasp
ATPgrasp_Ter
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ACT61315
LinkDB
All DBs
Position
complement(452783..455845)
Genome browser
AA seq
1020 aa
AA seq
DB search
MPKNNAIHSIAVIGSGPIKIGQAAEFDYAGTQACLSLKAAGYHVILINSNPATIMTDTAT
ADEVYLEPLTLTSVTKILRATHPDALLPTLGGQTGLNLAMALDQAGVLNELKIQLLGTSL
ATINQAEDRAAFKTLMKRLHQPIPASTTVHHVTSALSFAEKIGYPVIVRPAFTLGGSGGG
IANNAAELTQTLQRGLTMSPVTECLIEQSIAGFKEIEFEVMRDNQGTKIIVCSMENFDPV
GIHTGDSIVYAPVQTLTDTEYQQLRTAALTIVEALDIRGGCNVQLAQDPNSRQYYVIEVN
PRVSRSSALASKATGYPIAKIAADIAIGLNLSEIKNPVTQTTYAAFEPALDYVVAKIPRF
AFDKFPTADAHLGTQMKATGEVMAIGSTLEEATLKAIASLEIDPKTQASLTPDHHVTTTE
YIDQLTHPTDQRLFYLLAALQAGWPLAKLATLTQITPFFLSKLQHIAQLIRNIKQVPTSQ
HLLSAKKYGVSLATMAHYAQTSVATIAAMTADLPFVYKMVDTCAGEFASVTPYFYSTAFG
QTNESHPLGHSILVLGSGPIRIGQGIEFDYTTVHCVKAIQQAGYHAIIVNNNPETVSTDF
STSDKLYFEPLTIERLMPIIALEQPAGVIVQFGGQTAINLAHQLTKLGVTVLGTSVSATD
LTEDRQSFADCLRLLKIAQAAGTTVTELSGARQAAHAIGYPLLVRPSFVLGGRAMAIVHN
DHELTPVIKSAVAAGHGAPILMDQYLAGTECEVDVLSDGTSCFIPGIMEHIEGAGVHSGD
SITVYPPQHLSPAVQDKIVTIATKLAQHLHCVGMMNIQFVVTDDVYVIDVNPRASRTVPY
MSKVTHLPLAQLATRLILGQSLATLGLVPGLLTPAPQQIAIKAPVFSFNKLPQSPVVLSP
EMKSTGETLGIGPTFTTAWHAAMADSYHLETWQTVDGLITDIATVAQPAVQELFAANHLT
VTTIANTTDWPAKTKAVGFTLNDQPDNPVAIAALNHGQPLITAIDTLKTLLAVTPTPATI
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaacaatgccattcattcgattgctgtcatcggttctggtccaatcaaaatc
ggtcaagccgctgagttcgactatgccggtactcaggcttgtctaagccttaaagcggcc
ggctatcatgtcattttgatcaattcaaacccagcaaccatcatgactgacacggccacc
gccgacgaagtctacttagaacctctgactttgaccagtgtcactaaaattctgcgggcc
acccaccctgatgctttgctcccgacacttggtggacaaaccggattgaacctagcgatg
gcgttagatcaggctggcgttcttaatgagttgaagatccaactgctaggaacttcccta
gccaccatcaatcaagctgaagaccgggcagcatttaaaacacttatgaagcggctccat
caaccgattccagcaagtaccactgttcaccacgtgaccagtgcattgtcgtttgctgaa
aaaatcggttatccggtcattgttcgtccagcctttacactcgggggttcaggtggtggc
attgccaataatgccgccgaattgacccaaacgttacagcgggggctgaccatgtccccc
gtcaccgagtgcctgattgaacaaagtatcgccggcttcaaagaaattgaattcgaagtc
atgcgtgataatcagggtaccaagatcatcgtctgttccatggaaaacttcgatccggtc
ggtattcacactggcgattctatcgtgtatgcccccgttcagactttgactgacactgaa
tatcagcagctacgaacggcggctttgacgattgtggaagccctcgacattagaggtggg
tgcaacgttcaactcgctcaagacccgaatagtcgtcagtactacgtcatcgaagtgaac
ccgcgggtcagtcgttcatcggcgctagcttctaaagcgacgggatatccaattgccaaa
attgcagccgatatcgcaattggtctaaatttatctgagatcaagaatccagtcacgcag
acaacctacgcggcctttgaaccagctttagactatgtggttgccaaaatcccccggttt
gcgtttgacaagtttccaacggccgacgctcacttgggaacacagatgaaagccacgggg
gaggtcatggcgattgggtcaaccttggaggaagccacgctcaaggcgattgcttcgctt
gaaatcgatcccaagacccaagcgtccttgacccctgaccaccacgtcaccacgactgaa
tatatcgaccaattgacccacccgacagatcagcggctcttctatctattggcggcgctg
caagcgggttggccgttagcaaaattagcgacgctaacgcaaatcacgccatttttcttg
agtaagttacagcacatcgcccaactcatccggaatatcaagcaagtgccgacgtcccaa
cacctcttatcggcgaaaaagtacggtgtgagtctggcgaccatggcgcattatgcccaa
acttcggtagcgaccattgctgccatgactgctgatttacccttcgtttataaaatggtc
gatacgtgtgctggtgaatttgccagtgttacaccatatttttacagcactgcttttgga
caaactaacgagagtcacccactaggacacagtattttagtactcggatcaggccccatt
cgaatcggacaaggcatcgaattcgactacaccaccgttcactgtgtcaaggccattcaa
caagctggctaccatgcaatcatcgtcaataacaatcccgagacggtctccaccgacttt
tctacctcggataagctttatttcgagccactaacaatcgaacgtttgatgccaatcatt
gcgttggagcaacccgcgggcgtcatcgttcaatttgggggccaaactgcgatcaacctt
gcccatcagctcactaaattaggagtcaccgtcctaggaaccagtgtgtccgctaccgat
ttgaccgaagaccggcaatcttttgcggactgtttacgtctactaaagattgcccaagcc
gctggaacgaccgtaactgagttatccggtgcccgtcaagcagctcacgcaatcggttac
cccttactcgtacggccaagctttgtactcggcggccgggccatggcaatcgttcataac
gatcatgagctcacgccagttattaaatcagcggtggcagctggccatggtgcgcctatc
ttaatggaccaatacttggcgggaaccgagtgtgaagttgacgttctctccgacggaacg
tcgtgcttcattccaggaatcatggaacatattgaaggtgctggcgttcattctggcgat
tccattacagtctatccaccacagcacctcagccctgctgttcaagataagatcgtcacc
attgccaccaaattagcacaacacctccactgtgtcggtatgatgaacattcagttcgtc
gtcaccgatgatgtctacgtaatcgacgttaatccgcgggcaagtcgaacagttccttac
atgagcaaggttactcacttgccactggcacaattggcaacccggctaattctcggtcaa
agtttagcaacccttggcctagtccccggactcttgacacccgctccacaacaaattgct
ataaaggccccagtcttctctttcaataaattgccacaatcaccagtcgttttaagtcct
gagatgaaatcaactggtgagactcttggtatcggcccgactttcacgaccgcttggcat
gccgccatggctgatagttatcacttagagacttggcaaaccgtggatggtctcatcacc
gatattgccactgtggcgcaacccgcggtccaggaactgttcgcggctaaccacctcacc
gtcacaacaatcgctaacacgactgattggcctgcaaagactaaagcagtgggtttcacg
cttaatgaccaacctgacaatcccgtggctatcgctgcattgaatcatggacaaccattg
attacggcgattgataccttaaaaacattattagcagtaacaccaaccccagctaccatc
taa
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