Lactiplantibacillus plantarum JDM1: JDM1_0448
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Entry
JDM1_0448 CDS
T00946
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JDM1_0448 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpj01007
]
JDM1_0448 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpj03016
]
JDM1_0448 (lysS)
Enzymes [BR:
lpj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JDM1_0448 (lysS)
Amino acid related enzymes [BR:
lpj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JDM1_0448 (lysS)
Transfer RNA biogenesis [BR:
lpj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JDM1_0448 (lysS)
Prokaryotic type
Other AARSs
JDM1_0448 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
ORF11CD3
Motif
Other DBs
NCBI-ProteinID:
ACT61337
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Position
480979..482478
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AA seq
499 aa
AA seq
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MARQEQTMNDQLKVRREKMDELREEGIDPFGHRFERTDLAQDLQDKYGDMDKDELDAKQV
VATIAGRMLAKRGKGKVGFADIWDRSGKMQLYIRKDVVGEDTYHIFKRSDIGDFLGITGQ
VFKTDFGELTIKVTGLTFLSKALRPLPDKFHGLQNVEQIYRQRYLDLISNRDSFDRFLKR
TKIISAIRHHLDDQGFTEVETPMLHNQAGGAAARPFVTHHNALNIDLYLRIALELHLKRL
IVGGMEKVYEIGRVFRNEGMDREHNPEFTMMETYVAYFDFHDVMAETEGIFKAAAQAVTD
DGIVTYHDQKVDFNQPFKQIHMVDAIKEKTGIDFWQPMSIEDAQKLADEHHVKYEPYWKV
GHIINAFFEEFVEDTLNEPTFVYGHPVEISPLAKKNEEDPRFTDRFELFILGNEYANAFS
ELNDPIDQRQRFEAQAAERTAGNDEAEHIDEDFVEALEYGMPPTGGLGIGIDRLVMLMTD
ADSIRDVLLFPTMRPEEDK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgacaagaacagacgatgaacgaccaactgaaggttcgtcgcgaaaaaatggat
gaactgcgtgaagaggggattgatccctttggtcaccggttcgaacggactgatttagcc
caggacttgcaagacaagtatggggatatggataaggacgagctagacgctaaacaagtg
gtggcaaccattgctggacggatgctagctaagcgtggtaagggtaaagtcggttttgct
gatatctgggatcgctcaggtaagatgcagttatacattcgtaaagatgtagtcggcgaa
gatacttaccatatcttcaagcgttctgatattggtgatttccttggaattaccggccaa
gtttttaagacggactttggcgaattaacgattaaagtaactggtttaacgttcttatca
aaggcgttacgaccattgccagataagttccatgggttacagaatgtggaacagatctat
cgccaacggtatttggacttgatctctaaccgcgatagctttgatcgtttcttgaagcgg
acgaagatcatttcagcgattcggcatcatttagacgatcaaggcttcacagaagttgag
acgccaatgttgcataatcaagctggtggtgcggcagcacggccatttgtgactcaccac
aatgcgttgaacattgatctctacttacgaattgcgttggaattacatttgaagcgcctg
atcgttggtggcatggaaaaggtttatgagattggtcgggttttccgtaatgaagggatg
gaccgtgaacataatcctgaatttaccatgatggaaacttatgtcgcctatttcgacttc
catgatgtaatggctgagacggaaggtatttttaaagccgcagcgcaagccgtaactgac
gatggcattgtcacttatcatgatcaaaaagttgatttcaatcaaccatttaagcaaatt
cacatggtcgatgcgattaaagaaaagactgggattgatttctggcaaccaatgtcaatt
gaagatgcacaaaaattggcggatgaacatcacgtgaagtatgaaccatactggaaagtt
ggtcatatcattaatgcgttctttgaagaatttgttgaagacacgttgaatgaaccaacc
tttgtttatggtcatccagttgaaatttcgccattagctaagaagaatgaagaagatcca
cggtttactgatcgttttgaactcttcatcttaggtaatgaatacgccaatgcgttcagt
gaattgaatgatccaattgaccaacggcaacgtttcgaagctcaggctgcggaacggact
gctggtaacgacgaagctgaacatattgatgaagactttgtcgaggcgttggaatacggg
atgccgcctactggtgggttaggtatcgggattgatcggttggttatgttaatgacggat
gcggactcgattcgtgatgtcttacttttcccaacgatgcgtccagaagaagataaataa
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