Lactiplantibacillus plantarum JDM1: JDM1_0527
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Entry
JDM1_0527 CDS
T00946
Name
(GenBank) transcription regulator
Organism
lpj
Lactiplantibacillus plantarum JDM1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
EIIA-man
Sigma54_activ_2
AAA_5
AAA
AAA_22
Mg_chelatase
AAA_16
AAA_2
AAA_14
NACHT
RuvB_N
TrmB
AAA_29
T2SSE
ResIII
AAA_7
DEAD
DUF3196
HTH_IclR
ABC_tran
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ACT61416
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All DBs
Position
557427..560276
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AA seq
949 aa
AA seq
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MTRKSKICEYVRQHSDRHGLTTEMVATALMIARSNVSKELNALVREGQLHKLTGRPVHYV
PVNATATTATTTSGVANGATTERIPTAPVATSVPKPVVNDIFASMIGSHESLANQVEQAK
AAILYPPRGLNTLIIGPTGSGKTYFANAMYRFAETQQVLTNPQGLITFNCADYAHNPELL
MSHLFGYVKGSFTGANEDKDGLIQEADGGMLFLDEVHRLPPEGQEMIFYFMDHGTYSRLG
ETAKSHHANVRLVCATTEDPESTLLQTFVRRIPITIQLPAFNHRSAKERLELLKALLSLE
ANRINKQIRLTEDVVQALLGSVTFGNVGQLKSNIQLVCAQGFVNSIENDSEITITMDDLP
QNIRSGLMTVASNRHELGAISELLDPVLIVKPNDGPTPLRNKNDNYELPYNLYEIIGDKA
ALLRREGLDKEHINRFITTDINVHLKSFYKQNQLEVSPENKLAEIVDQDVIDFTKTAQMT
VQDMLGYNFKDNFIYAVSLHVSSFIKRIQAGKPMRQMSSDMLAMVREYPAEIKAAEALKQ
GLEERYHLPIPKSEVYYLAILLISLKSMQLNGKVGVLVAAHGMSTASSMAQVVGQLLDDY
DVQAFDMPLDMDPSVAYDHVKRRVEKLDSGKGILLLVDMGSLTTFGERIQQETGIATRTI
DMVTTPVVLEAVRKASLVDSDLDSMYQELVGFKGYSRISRNLPTDSQRATVKPALATDKT
AQRAIIAICATGVGTAERIKSILDSLLAQNFIEGITVFPISVVEMKTRIQQISQNYQIIA
ATGITKPELDVPFISLEELLQGGGEKFIDQLATGIDSPQTMAEESQQLTPELCERYLGDY
FTFLNPKKLTGILWEYSEVIATHLDGVMTNAFRIDLIMHLAGALERTAIKDEISAPTEEM
PDIMASKWYPLVQQANQQLTDQLQLTFSDAENYYIVQLLETHQAKVAMS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
ttgaccagaaaatccaagatttgtgaatacgtccgtcaacatagcgatcgacacggactg
acgacggaaatggtagcgaccgctttaatgatagcgcgttcaaacgtcagcaaggaatta
aatgcactggtgcgagaaggccagttgcacaagctgacagggcggcctgtgcactatgtt
ccggtgaatgcaacagccacaacggccacaacaactagtggcgtagcgaatggagcgacg
acagagcgaataccgacagcgcccgtcgcgacgtctgtgcctaaaccggttgtaaatgat
atatttgccagcatgattggctcgcatgagagccttgctaatcaagtggaacaggcgaaa
gcggccattctttacccaccgcggggattaaatacattaatcattggcccgactggttct
ggtaaaacttactttgcaaacgccatgtatcgttttgcggaaacccaacaagtcttaacg
aacccgcaaggcctgattacgttcaattgtgccgattatgcgcataatccggaattattg
atgtcgcatttgtttggttatgttaaggggtcttttacaggtgctaatgaagataaggac
ggtttgatccaagaagcggatgggggcatgttgttcttagatgaagtgcaccgtctacca
ccagaaggtcaggaaatgattttttatttcatggatcacgggacttattcacgactcggt
gagacggcgaagagtcaccatgccaatgtccgcttagtttgcgcaacgaccgaggaccca
gaaagtaccctactgcagacctttgttcggcgaattccgattacgattcagctaccagcg
ttcaatcatcgctcagccaaggaacgtttagaattactgaaggcattattgtcattggaa
gctaatcgaatcaataaacagattcggttaacggaggacgtggtgcaggccttacttggc
tcagtcacatttgggaacgtcggtcagttgaagtcgaacattcagctggtgtgtgcccag
ggttttgtcaatagcatcgaaaatgacagtgaaatcacaatcacgatggatgatttgcca
caaaatatccgtagcggtctcatgacagtagcctctaaccgtcacgaactgggggccatc
tctgagttgttggacccggttctcatcgtgaagccaaatgatggtccaacgccgcttcgt
aataagaacgataattatgaattaccatataatttatatgagattattggtgataaagca
gcgttactccgacgggaaggccttgataaagaacacatcaatcgtttcatcacgaccgat
atcaatgtgcatttaaaatcattttataaacaaaatcagttagaagtttcaccagaaaac
aagttagccgagatcgttgatcaggacgtcattgattttaccaagacggcgcagatgacg
gttcaagacatgctaggttataatttcaaggataactttatttacgctgtgagcttgcac
gtcagttcctttatcaaacgcatccaggcaggcaagcccatgcgtcaaatgagttcggat
atgttagcgatggtgcgtgaatatccggctgaaatcaaagcagcggaggcgctcaagcaa
ggattagaggaacggtatcatttaccgattcccaagtccgaagtttattatctggccatt
ttgctcatctcgttaaaatcgatgcagcttaacggcaaagttggcgtgttggtggcagcg
cacgggatgagtaccgcgtcttccatggcacaggtcgtcggacaattgttagatgattat
gatgttcaggctttcgacatgcctctcgatatggacccgagtgtcgcctatgatcatgtc
aagcgacgagtagaaaagcttgattctgggaaaggaattttgttactagtcgatatgggg
tcgttaacgaccttcggggaacgaattcagcaggagacaggaattgcgacgcgaacgatt
gacatggtgaccacgccggttgttttggaagccgttcggaaggctagcctggtcgatagt
gatctggattctatgtatcaggagctcgttggtttcaaaggttattcgcgaatttcacgg
aacctaccaacggatagtcagcgcgcaacagtcaagcccgccttagcgacggataagacg
gcacaacgggcgattattgcaatttgtgcgaccggcgttgggacggctgaacgtatcaag
tcaattttagacagtttattagctcaaaactttatcgaaggtattacggtattcccaatc
tcagtggtcgaaatgaagacacggatacaacaaatcagtcaaaattatcaaatcattgcg
gcaactgggattacaaaacccgaattagacgtcccttttatttcattggaagaattgcta
caaggtggtggcgaaaagtttattgaccagttagcgacgggtatcgattcgccacagacc
atggcggaagaaagtcagcagttgacaccggaactctgcgaacggtacttaggcgattac
ttcacgtttttaaatcctaagaagttaacgggaattttatgggagtatagcgaagtgatt
gcgacgcacttggatggtgtaatgacgaatgcttttcgcattgatttgattatgcactta
gcgggtgcgctagaacgaacggccatcaaagatgaaatttcggcacccaccgaagagatg
ccagacattatggcatcgaagtggtacccacttgtgcaacaggccaatcagcaattgaca
gatcaactacagttaaccttctcagatgctgaaaattattatattgtgcaattattggag
actcatcaggcaaaggtcgcgatgagttga
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