Lactiplantibacillus plantarum JDM1: JDM1_0544
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Entry
JDM1_0544 CDS
T00946
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lpj
Lactiplantibacillus plantarum JDM1
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpj03400
]
JDM1_0544 (radA)
DNA repair and recombination proteins [BR:
lpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JDM1_0544 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
ABC_tran
Lon_C
AAA_22
AAA_16
AAA_24
SLFN-g3_helicase
AAA_30
nSTAND3
RecA
NTPase_1
AAA_14
DUF7125
Rad51
AAA
NPHP3_N
KdpD
AAA_5
AAA_19
DZR
NACHT
ATPase_2
Zeta_toxin
DUF7129
KTI12
HypA
Motif
Other DBs
NCBI-ProteinID:
ACT61433
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All DBs
Position
576034..577413
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AA seq
459 aa
AA seq
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MAKAKTQFVCSNCGYSTPRYLGRCPNCGEWNTLTEEHFDTKPDRKSRVSFAGKSAKPQRL
KEVSLTKTPRVKTKLKEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSGQLAETGGSV
LYVTGEESASQVKMRADRLAVSSEDFYLYPETDMSNIRSTIESTHPEFVVIDSVQTMQEP
DMDSAIGSVSQIREITAELLQIAKTNGITIFIVGHVTKGGAIAGPKILEHMVDTVLYFEG
DLHHTYRILRAVKNRFGSTNELGIFEMRTGGLYEVANPSEIFLEERLKDATGSAIVVSME
GTRPILVEVQALVTPTVFGNAKRTASGLDHNRVSLIMAVLEKRASLMLQNQDAYLKAAGG
VKLDEPAIDLAIAVSVASSYRDQQTRPSDCFVGEVGLTGEIRRVNRIESRVGEAAKLGFK
RIFIPKNNLQGWDIPTGIEVIGVATLKEALQLALQQPNY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcaaaaactcagtttgtttgttctaactgtggttattcaacaccgcgatat
ttaggacggtgtccgaactgtggtgaatggaatacactaactgaagaacattttgataca
aaaccggaccgcaagtcgcgggtgagctttgcgggtaagtcggctaagccacaacgactc
aaagaagtgtcgctgactaagacaccgcgtgtcaagactaagctgaaagagttcaaccgg
gtcttaggtggcggcgttgtgccaggttcactagttttgatcggtggtgatccaggtatt
ggtaagtcaacgttgctactgcaagtttcggggcaattggccgagacgggtggctccgta
ctatacgtgactggtgaagaaagtgcctcccaagtgaagatgcgggcggaccggttggct
gttagcagtgaagacttttatctttatcctgagactgatatgtcgaatattcgttcaacg
attgaatcgacgcatccagaatttgtggtcattgattcggtacaaacgatgcaagaacct
gatatggactctgcgattggttcggtatcacaaatccgtgaaattacggctgaactactg
caaattgcgaagactaacggcattaccatttttattgtgggtcatgtgactaagggtggt
gccattgcggggcctaagatcttagaacatatggttgataccgttttgtactttgaaggt
gatttacatcatacgtaccgcattttacgggcagtcaagaatcgattcgggtcaacgaat
gaactgggaatatttgagatgcgaacgggcggtttgtatgaagtggccaatccctcagag
atcttcttggaagaacgtctgaaggatgctacgggttccgccatcgttgtttcaatggaa
ggaacacgaccaatcttagtagaagttcaagcgctggtaacgccaacggtctttggtaat
gcgaagcggaccgcaagtggcttggatcataatcgagtctccttgattatggcagtgttg
gaaaaacgggcgagtctaatgcttcagaaccaggacgcgtatttgaaagcggccggtggc
gttaagttagatgaaccggcgattgacttagctattgcggtcagtgtggcttctagttat
cgtgaccagcagactcgtccgagtgactgttttgttggtgaagtcggtttgactggtgag
attcggcgggtcaaccggattgaatcacgagttggtgaggcggctaagctaggttttaaa
cgtatctttattcctaagaataatctgcaaggttgggatatcccaactggaatcgaagta
attggagttgccacgctaaaagaagcgctccaattagcattacaacaaccaaattattaa
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