Lactiplantibacillus plantarum JDM1: JDM1_0581
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Entry
JDM1_0581 CDS
T00946
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj03030
DNA replication
lpj03430
Mismatch repair
lpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JDM1_0581 (holB)
03430 Mismatch repair
JDM1_0581 (holB)
03440 Homologous recombination
JDM1_0581 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpj03032
]
JDM1_0581 (holB)
03400 DNA repair and recombination proteins [BR:
lpj03400
]
JDM1_0581 (holB)
Enzymes [BR:
lpj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JDM1_0581 (holB)
DNA replication proteins [BR:
lpj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JDM1_0581 (holB)
DNA repair and recombination proteins [BR:
lpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JDM1_0581 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
UPF0154
AAA
Ig_ILCR1
Motif
Other DBs
NCBI-ProteinID:
ACT61470
LinkDB
All DBs
Position
611229..612248
Genome browser
AA seq
339 aa
AA seq
DB search
MATTESFAQTLAAKQPRLLAAFKHIIAQNHLAHAYLFAGMEGAGQPELAHWIAQRLFCLH
INDGEPDGTCEECVRIANGSHPDIVTVAPEGQRIHVDQVRYLKAEFSKSAVEGNRKLFII
NDAEKMTASAANSLLKFIEEPSGNVTALLLTTNKQLMLPTIISRTQVIEFPPLNAQALQQ
TFEQAGIAPNQAQMLRGLTNSVTQAQALLADDWLPQAAQALWRWFDQAVKGDPRSFVAVQ
VNLVGLAKDADHQLVMLDLIAALFQDLLQLHFEVATTALTFGQYQKELAGLTAEVSDEQL
IAATELALTAKRQLASNISFQNVLEGLTLKLWPIFQTNA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaccgagtcatttgcgcaaacgttagcggcgaaacagccccgcttattagcg
gcatttaaacacatcatcgcccagaaccatctggcccacgcgtacttattcgcggggatg
gaaggcgctggacaaccagaactggcccattggattgcgcaacggttgttctgcctgcat
attaatgatggtgaaccagatggcacttgtgaggagtgcgtccggattgctaatgggtcg
caccctgatattgtgacagtggctcccgagggtcagcgaattcacgttgatcaggttcgt
tacttaaaagctgaattctctaagagtgcggtcgaaggtaaccggaaactgttcatcatt
aatgatgcggagaagatgacagcgagtgctgccaatagcttattgaagtttattgaggag
ccaagtggtaacgtcacggccttgttattaacgactaataagcaactgatgctaccaacg
attatttcacgaacccaggtgatcgaattcccaccattaaatgcgcaggcgttacagcag
acgtttgaacaggccgggattgcgccaaaccaagcgcagatgttacggggcctgacaaat
agcgtgacccaggcgcaggcgttgctagcggatgattggttaccacaagctgcgcaagca
ttgtggcggtggtttgaccaggctgttaagggtgatccacggagttttgtggctgtgcag
gtcaatttagttggtttggctaaggacgctgatcatcagctggttatgttggatttaatt
gcggccttgttccaagatctattgcaattacattttgaggtggcaacgacagcgttaacc
tttggtcagtaccaaaaagaattggccgggttaacggctgaagtcagcgatgagcagttg
attgcggcgacagaactagctttaacggccaagcgccagctagctagcaatattagtttt
caaaatgtcttagaaggcttaacgttaaagttatggccgatttttcaaacaaacgcttaa
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