Lactiplantibacillus plantarum JDM1: JDM1_0674
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Entry
JDM1_0674 CDS
T00946
Name
(GenBank) DNA-directed DNA polymerase III, epsilon chain (putative)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj03030
DNA replication
lpj03430
Mismatch repair
lpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JDM1_0674
03430 Mismatch repair
JDM1_0674
03440 Homologous recombination
JDM1_0674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpj03032
]
JDM1_0674
03400 DNA repair and recombination proteins [BR:
lpj03400
]
JDM1_0674
Enzymes [BR:
lpj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JDM1_0674
DNA replication proteins [BR:
lpj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JDM1_0674
DNA repair and recombination proteins [BR:
lpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JDM1_0674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motilin_assoc
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACT61562
LinkDB
All DBs
Position
complement(719392..719913)
Genome browser
AA seq
173 aa
AA seq
DB search
MDFETANAKRDSACSLALTVVRNNQISDEFYTLIKPESDFFWRNVQIHGIHEADVADAPK
FPDVWQHIEPFFQRDRLVIAHNAPFDIGVLRNTLAHYGISAPEYLSMDTVKTSQRFYPEL
PNHKLDTVCQALDIDLQHHHNALDDSLACANILLTEAQAFGTEQLKPFVRVQG
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggactttgaaacggcgaacgcgaaacgcgacagtgcttgttcactggcgctaacggtt
gtccgtaataaccaaatcagcgatgaattttacacactcatcaaaccagagagcgatttt
ttctggcggaacgtccaaattcatgggattcatgaagcagatgtcgcagacgcgcccaag
tttccagacgtttggcaacacattgaaccatttttccaacgcgaccgcctcgtaattgcg
cacaacgcgccttttgatattggtgtgttacgcaatacgcttgcccactacggcatcagc
gcgccggagtacctatccatggacaccgtcaagaccagtcaacggttctatccagaattg
cctaatcacaagctggatacagtctgtcaagcattggatatcgacctgcagcatcatcat
aatgcactagatgacagcctagcttgcgccaacattttactcaccgaagcgcaagctttt
ggaaccgagcaactcaaacctttcgttcgcgttcagggttaa
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