Lactiplantibacillus plantarum JDM1: JDM1_1114
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Entry
JDM1_1114 CDS
T00946
Symbol
rsuA
Name
(GenBank) pseudouridylate synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpj03009
]
JDM1_1114 (rsuA)
Enzymes [BR:
lpj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JDM1_1114 (rsuA)
Ribosome biogenesis [BR:
lpj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JDM1_1114 (rsuA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACT62001
LinkDB
All DBs
Position
1199371..1200111
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AA seq
246 aa
AA seq
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MRVDKFLHAMRIGTRTQVRRLIKDGHITANGEPVISGKQQINPGSDTVFLDDVQVRYQQY
FYYVMNKPVGVITATTDSAAKTVMDLFNTTDFRDDLFPVGRLDKDTEGILVITNDGALSH
DLLSPNHHVTKVYEAEVTGEITAAQLANFNDGITLKDGTELQPAQAEIVQFHEIENFTTI
RIMIHEGKYHQVKRMVGTLGERVVGLRRIKFGSLTLPVGLLAGNYRALTDDELTALKADA
NQPVGE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagataaatttttacatgcgatgcgaattggtacgcggactcaagtacgtcgt
ctgattaaagatggtcatatcactgccaatggtgagccagtaatctctggcaaacaacag
atcaaccctggcagtgacaccgtctttttagatgacgtgcaggtccgttaccaacaatac
ttctattatgtgatgaataagccagtcggggtcatcacggcaacgacggattccgctgcg
aaaacggtgatggacctgttcaatacgacggattttcgtgacgatctatttcccgtgggt
cgtctcgataaagatactgagggaatcttggtcattacgaacgatggggccctatcgcac
gacctattgtcgccgaaccaccatgttacgaaggtctatgaggctgaagtaacgggggaa
atcactgcagctcaattggctaattttaatgatggaatcacgttaaaggacgggactgaa
ttgcaaccggctcaggctgagattgttcaattccatgaaatcgagaattttaccacgatt
cgaatcatgatccatgaaggcaagtatcaccaagttaagcggatggtcggaacgttaggt
gaacgggtcgtcgggttacggcgaatcaagtttggttcgttaacgctacccgttggctta
ttagcggggaactatcgtgcgctgactgatgacgaactaacagcgttgaaggcggatgcg
aaccaacccgtaggcgaatag
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integrated database retrieval system
