Lactiplantibacillus plantarum JDM1: JDM1_1186
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Entry
JDM1_1186 CDS
T00946
Name
(GenBank) conserved hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpj03019
]
JDM1_1186
Messenger RNA biogenesis [BR:
lpj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JDM1_1186
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
ACT62073
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All DBs
Position
1279424..1280404
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AA seq
326 aa
AA seq
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MAKKLFDYQLDETVDGYFLLKDSEVRIAKNGKKFLAINFQDTSGEISGKFWDASDTDVEN
FQAGRIVHLKGKRENYQGNPQIKIQQMRLTHSGEPQEVQQFVEHAPLKTDTMADEINQFV
FEITEPNWNRIVRHMLTTFHDRFFSYPAAKKNHHAFAGGLAYHTLSILRLAKAVADQYPH
VNRALLYAGAILHDMGKTIEMSGPVSTTYTLAGNLVGHIVLIDEQIVETCQQLKIDEQSE
SVLVLRHTILAHHGLLEYGSPVRPHIMEAEILHDLDELDASIQMMQTSLGHAEPGTYTER
IFAMDGRNFYRPTGDQTKGELSDEQN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagttatttgattatcaattagatgaaaccgtggatggctattttttgttg
aaagattcggaagttcgcatcgccaagaacggcaagaagtttttagccattaattttcag
gatacttccggcgagatttccgggaagttttgggatgcaagcgatacagatgtcgaaaac
tttcaggcaggtcggatcgttcatctgaaaggtaaacgcgaaaactatcagggtaatccg
caaatcaaaattcaacaaatgcggctcactcatagtggcgaaccgcaagaagtgcaacaa
tttgtggaacacgcaccactaaagaccgacacgatggcggatgaaatcaatcagtttgtc
tttgaaattactgaacctaattggaatcgaattgttcgccacatgttaacgacatttcat
gaccggttctttagctatcccgcggcgaagaaaaatcatcacgcgttcgccggtggctta
gcctatcacacgttatcaattttgcgcttagctaaggcagttgccgatcagtatccccac
gttaaccgggccttactatacgccggtgcgattttgcacgacatgggtaagacgattgaa
atgtcggggccggtctcgacgacttatacgttggcaggaaacttggtcggtcacattgtc
ctgatcgatgaacaaatcgtggagacttgtcaacagttgaaaattgacgagcagtcggaa
tctgttttagtcttgcggcatacgattcttgcgcaccatggtttgttagaatatgggtca
cccgttcggcctcatattatggaagctgaaatcttacatgacttagacgagttggacgcg
tcgattcaaatgatgcagacttcacttggacacgcagaaccgggcacgtatacggagcgg
atctttgccatggacggtcgtaacttttaccggccaactggtgatcaaacgaagggtgaa
ttatcagacgaacaaaactaa
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