Lactiplantibacillus plantarum JDM1: JDM1_1262
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Entry
JDM1_1262 CDS
T00946
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj03030
DNA replication
lpj03410
Base excision repair
lpj03420
Nucleotide excision repair
lpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JDM1_1262 (polA)
03410 Base excision repair
JDM1_1262 (polA)
03420 Nucleotide excision repair
JDM1_1262 (polA)
03440 Homologous recombination
JDM1_1262 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpj03032
]
JDM1_1262 (polA)
03400 DNA repair and recombination proteins [BR:
lpj03400
]
JDM1_1262 (polA)
Enzymes [BR:
lpj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JDM1_1262 (polA)
DNA replication proteins [BR:
lpj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JDM1_1262 (polA)
DNA repair and recombination proteins [BR:
lpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JDM1_1262 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JDM1_1262 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Cupin_8
Motif
Other DBs
NCBI-ProteinID:
ACT62149
LinkDB
All DBs
Position
1358365..1361013
Genome browser
AA seq
882 aa
AA seq
DB search
MAKKLLLIDGNSVAFRAFFALHSQLERFVNPDGLHTNAIYGFNTMLDHMIKAVEPTDMLV
AFDAGKTTFRTAMYDNYKGGRAKTPSEFSEQMPYIKQLLDAYGIKHYELKDYEADDIIGT
LAAQADQTGYTTTVVTGDRDLTQLTTEHTTVAVTVKGVSEVEHYTPAHVEEKLGITPAQI
IDMKGLTGDTSDNYPGVTKVGEKTALKLLKQYGTMEGIYENIDAMKQSKMKEHLIEDREQ
AAQAKVLATIKRDAPIDVQLADLSYDGPDLDQLAAFYQKMDFQSFLKKLHLQSDEPATPI
DYTVLTKANLTELQQFTDHVDFYLEMPTPNYHTSAFAGFAIGADDHWYISRDVELLMQPT
VADLLSSTTITKDVFDMKRTTVGLNRLGIQLGKVDFDLLLVSYLLDTNDNSNDLGSLAEQ
HGYTDLPSDETVYGKGVKRAIPEDDDVFFSHLARKLAAIASLKPQLLKELAANEQDQLYD
DIEKPMANVLAQMEIAGITVDSSRLKAMGSQFTERLSEIEQTIYQEAGEEFNINSPKQLG
HILFEEMKLPVIKKTKTGYSTAVDVLEKLAPEAPIVANILQYRQISKIQSTYVVGLLDAI
HSADQKVHTRYLQTLTQTGRLSSVDPNLQNIPVRLEEGRKIRQAFVPSHEGWQIFSSDYS
QIELRVLAHITDDENMQAAFKAGDDIHAATAMRIFHLNSAEEVTPNIRRQAKAVNFGIVY
GISDYGLSQNIGITRKQARSFIDAYFKEYPGVKKYMDEIVQTAKKQGYVETISHRRRYLP
DINSKSFNQRSFAERTAMNTPIQGSAADIIKIAMIKMQDKLQAAGLKATMLLQVHDELIF
EAPKEEIPVLEKLVPSVMDSAVQLAVPLKVESHYGDTWYDAK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaattattactgattgatggtaacagtgtggcatttcgggcgttctttgcg
ttgcatagtcaactggaacggttcgtaaatccagacggcctgcataccaacgccatttat
ggcttcaatacaatgcttgaccacatgatcaaggcagtcgaacccacggatatgttagtg
gcttttgatgcgggtaagaccacgtttcgaacagccatgtacgataattacaagggtggc
cgggctaagacgcctagtgagttttctgaacaaatgccgtatatcaaacagctattagac
gcgtatggtatcaaacattatgaattaaaagactacgaagccgatgacattattggcaca
ctggccgctcaagcggatcaaaccggctacaccacgacggtcgtcactggtgaccgtgat
ttgacgcagttgacgaccgagcataccacggtggccgtgaccgttaaaggtgtttctgaa
gtggaacactatacgccggcgcacgttgaagaaaagctgggcatcacaccggcacaaatt
attgacatgaaggggttgacaggtgatacctcggataactatccgggtgtcaccaaggtt
ggtgagaagaccgcccttaaattactcaaacagtatggtacgatggaaggcatttatgaa
aacatcgatgccatgaagcagagcaagatgaaggaacatctgattgaggatcgcgaacaa
gcggcgcaggctaaggtgctagcaacaatcaagcgggatgcgccgattgatgttcaattg
gctgatttatcctatgatggcccggatcttgaccagctggccgcgttttatcagaagatg
gactttcaatcatttttgaagaaattacacctacagtcggacgaaccagcaacgcccatt
gattataccgtcttgacgaaagctaacctgacggaattgcaacaatttaccgatcacgtg
gacttttatttggagatgccaacgccgaactaccacacgtcggcctttgctggctttgcc
atcggagcggatgatcactggtacatcagtcgggatgtggaattattaatgcaaccgact
gtggctgatctcttgagtagcacaacgattaccaaggacgtttttgatatgaaacgcacg
acggtcgggcttaatcgtttgggtattcagctaggtaaagtcgattttgatcttttactc
gtttcatacttattagatacaaatgataacagtaacgacttgggaagtttagctgagcaa
cacgggtacactgacttgccgagtgacgagaccgtttatggtaagggcgttaagcgcgct
attcctgaagatgatgacgtcttctttagtcatctcgcccggaaattggccgcaatcgct
agtttgaagccacagttattaaaggaattggcagccaatgagcaggatcaactttacgat
gatatcgaaaaaccgatggctaatgtcttagctcagatggaaatcgccggcattacggtc
gacagcagtcgacttaaagccatgggcagtcagtttacagaacggttgagtgaaattgaa
cagacgatttatcaagaagccggtgaagagttcaatattaattcacctaagcaactaggt
cacatcttgtttgaagaaatgaaattacccgtaatcaagaagaccaagacagggtattct
accgccgtagacgttctagaaaagttagcaccggaagcaccaatcgtcgctaatatttta
caatatcgtcagatctcgaagattcaatcgacctacgttgtcggtttgttagatgccatt
cattctgctgatcaaaaggtgcatacgcgctacttgcaaacgttgacccaaaccggccgg
ttgtcgtccgttgatccaaacttacaaaacattccggtgcgcttggaagaaggacgtaag
attcgacaagcctttgttcctagtcatgaaggttggcagattttctcgtctgattattcg
caaatcgaattacgggttctcgcgcatattactgatgatgaaaatatgcaggccgctttt
aaagcgggtgatgatattcatgccgcaacggccatgcgaatctttcatttgaactcagct
gaagaggtgacgccaaatattcgacggcaagctaaggcagttaactttggaatcgtctat
ggaattagtgattacggcttgtcacaaaatatcggcattacgcgtaaacaggctcgcagc
tttattgacgcttacttcaaagaatatccgggtgtcaaaaagtatatggatgaaattgtc
caaacggcgaaaaaacaaggttatgtggaaaccatttcacatcgacgccggtacttgcca
gatattaattccaagagcttcaaccaacgctcattcgctgaacggacagccatgaatacc
cccatccaagggagtgcggctgatattatcaagattgcgatgattaagatgcaagataag
ttacaggctgcgggtttgaaagcaaccatgctgttacaagttcatgatgaattgattttt
gaagcgccaaaagaagaaattccagttttagaaaaattagtgccaagcgtgatggattcc
gccgtacagttagccgtaccgttaaaggttgagagccactacggtgatacttggtacgat
gcaaaatag
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