Lactiplantibacillus plantarum JDM1: JDM1_1666
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Entry
JDM1_1666 CDS
T00946
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JDM1_1666 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpj03400
]
JDM1_1666 (nfo)
Enzymes [BR:
lpj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
JDM1_1666 (nfo)
DNA repair and recombination proteins [BR:
lpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JDM1_1666 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACT62553
LinkDB
All DBs
Position
complement(1767733..1768629)
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AA seq
298 aa
AA seq
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MLRLGSHVSMKAPDMLLGSANEAASYGANTFMIYTGAPQNTRRKPIDELKIDEAQPIIEA
HDLRQIVVHAPYIINLGNTKKPGYFEFATDFLYQEIQRADAVGATQLTLHPGAHIGAGAD
VAIAQIIKGLNAVIRPEQHVQIALETMAGKGTEVGRTFEELAQMIDGVTYNEKLSVTFDT
CHTSDAGYAIKDDFDGVLNEFDHVIGLDRLKVIHLNDSKNPQGAHKDRHTNIGMGTIGFD
TLNKVAHHPQLPDISKILETPYVGEDKKHQLPPYKYEIAMLRAGEFNPHLIEDIEQQR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcttagattaggttcacatgtttcgatgaaggcacccgacatgttgctcggatctgcc
aatgaggcggcaagttacggcgccaacacatttatgatctatacgggcgcaccccaaaat
acacggcgtaaaccaattgacgaactgaaaattgacgaagcacagccgataatcgaggct
catgacctccggcagatcgtcgtacatgccccatacatcattaatttaggtaatacgaaa
aagccgggttattttgagtttgcaacggactttctctatcaagagatccagcgtgcagat
gccgttggcgcaacacaattaacgctccatccgggagcacatattggtgccggagcggat
gttgccattgcgcagatcatcaagggactgaacgcggttattcggccagagcagcacgtt
caaatcgcgctagaaacgatggctggcaaaggaactgaagttggccggacgtttgaagaa
ctcgcacagatgatcgacggggtgacttataatgaaaagttatcggttacctttgatact
tgccatactagtgatgccggttacgcgattaaggacgatttcgacggtgtcctgaatgaa
tttgatcatgtgattgggctggatcgtttgaaagtgatccatctcaatgattctaagaat
cctcaaggtgctcacaaggaccggcacacgaatatcggtatgggaacgattggctttgat
actttgaataaggtcgcccatcatccacaattgccagacatcagcaagattttagaaacg
ccgtatgtcggggaagataagaaacatcaattgccaccttataagtatgagattgcaatg
cttcgggccggggagtttaatccgcatttgattgaagatattgaacagcaacgttaa
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