Lactiplantibacillus plantarum JDM1: JDM1_1829
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Entry
JDM1_1829 CDS
T00946
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj00300
Lysine biosynthesis
lpj00470
D-Amino acid metabolism
lpj01100
Metabolic pathways
lpj01110
Biosynthesis of secondary metabolites
lpj01120
Microbial metabolism in diverse environments
lpj01230
Biosynthesis of amino acids
Module
lpj_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JDM1_1829 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JDM1_1829 (dapF)
Enzymes [BR:
lpj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JDM1_1829 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ACT62716
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Position
complement(1938890..1939888)
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AA seq
332 aa
AA seq
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MAVKMIKVHGSGNDFYLLDQTQFQAPLSDADLKQLAINICKRDGAGLYDGADGVLVVDKS
EHPQVLGRMRVINADGTEASMCGNGLRTVARYLGTQNSQEDFRVQTMYADLKVQAVADFA
AHVPAYSVEISPVTFDAQTLGMHANNDATTIINEKIPALSADLKFSAVAVPNPHLIAFVD
HDTLVGPELGRIGEWMNDGKNQIFPDGVNVSFVEVLGPNSIFVRTFERGVGFTNACGTAM
SASSLMYVLLHQESTDFNQEIHVTNPGGMVKTVVHQGADEEYWMELIGNATFVRIVTLPL
EDALQGDYSPATATETGEQVAYEDFVANLAKA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaaaatgatcaaggtacacggttctggtaacgatttttatttattggatcaa
acacaatttcaagcaccgttatcggatgcggatttgaagcaattggcaattaacatttgt
aaacgtgacggcgcaggtttgtacgatggcgctgatggcgtgttggttgttgataaatca
gaacatccacaagtacttggtcggatgcgggtcattaatgcggacgggacggaagctagc
atgtgcggtaatgggctacggaccgttgctcgttatttgggcacgcaaaatagtcaggaa
gacttccgggttcagacgatgtatgcggacttaaaggtgcaggccgttgctgattttgcg
gcccacgtcccagcttacagtgttgaaatttcacccgtaactttcgacgcgcagacactt
ggcatgcatgcgaataacgatgcgacgacaattattaatgaaaagattccagcgctgtct
gctgacttgaaattctcagctgtggcggtgcctaatccgcatttgattgcgttcgttgac
catgatacgttggttggccccgaattaggacgtatcggtgaatggatgaatgatggtaaa
aaccaaattttccctgatggcgtcaacgttagttttgtggaagtcttaggaccaaattca
atttttgtacgcacgtttgaacgcggggttggttttaccaatgcttgtgggactgcgatg
tcggcttcctcattgatgtacgtgttattacaccaagaaagtaccgattttaatcaagaa
atccacgtcaccaatcctggtgggatggtcaaaaccgttgttcaccaaggtgccgatgaa
gaatactggatggaattgatcggtaacgcgacgttcgtccggatcgtgactttgccatta
gaagatgcgcttcagggcgactacagcccagctaccgcaacggaaactggtgagcaggtt
gcttatgaagatttcgtcgctaaccttgcaaaggcctaa
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