Lactiplantibacillus plantarum JDM1: JDM1_1985
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Entry
JDM1_1985 CDS
T00946
Symbol
glyA
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj00260
Glycine, serine and threonine metabolism
lpj00460
Cyanoamino acid metabolism
lpj00630
Glyoxylate and dicarboxylate metabolism
lpj00670
One carbon pool by folate
lpj00680
Methane metabolism
lpj01100
Metabolic pathways
lpj01110
Biosynthesis of secondary metabolites
lpj01120
Microbial metabolism in diverse environments
lpj01200
Carbon metabolism
lpj01230
Biosynthesis of amino acids
lpj01240
Biosynthesis of cofactors
lpj04981
Folate transport and metabolism
Module
lpj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JDM1_1985 (glyA)
09102 Energy metabolism
00680 Methane metabolism
JDM1_1985 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JDM1_1985 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JDM1_1985 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JDM1_1985 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JDM1_1985 (glyA)
Enzymes [BR:
lpj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JDM1_1985 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ACT62872
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Position
complement(2110633..2111871)
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AA seq
412 aa
AA seq
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MNYQEQDPEVWAAISKEQARQQHNIELIASENIVSKGVRAAQGSVLTNKYSEGYPGHRFY
GGNEYIDQVETLAIERAKKLFGAEYANVQPHSGSQANAAAYMALIQPGDRVMGMSLDAGG
HLTHGSSVNFSGKLYDFQGYGLDPETEELNYDAILAQAQDFQPKLIVAGASAYSRLIDFK
KFREIADQVGALLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGMILAKEK
YGKKINSAVFPGNQGGPLDHVIAGKAIALGEDLQPEFKVYAQHIIDNAKAMAKVFNDSDL
VRVISGGTDNHLMTIDVTKSGLNGRQVQDLLDTVYITVNKEAIPNETLGAFKTSGIRLGT
PAITTRGFDEADATKVAELILQALQAPTDQANLDDVKQQAMALTAKHPIDVD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccaggaacaagatccagaagtatgggctgcgattagtaaggaacaggcacgg
caacaacataatattgagttgattgcttctgagaacatcgtttcaaagggcgtccgggca
gcgcaggggagtgtgctgaccaataaatactctgaaggctatccgggtcaccgcttttac
ggtggtaacgaatacattgaccaagtggaaaccttagcaattgaacgggctaagaaatta
tttggtgcggaatatgctaatgtgcaaccacactctggttcccaagccaatgcggctgca
tatatggcactgattcaacctggtgaccgggtgatggggatgtcactagatgctggggga
cacttaacacatggatctagtgtgaacttctctggtaaactttacgattttcaaggttat
gggctcgatcctgaaaccgaagaattaaactatgatgcaattcttgcacaagcacaagat
tttcaaccaaagttaatcgttgcgggggcttctgcttatagtcgattgattgatttcaag
aagtttcgcgagattgcagatcaagttggggccttattgatggttgatatggctcatatt
gccggcttagttgcggccgggctacatcctaatccagtgccatatgctgatgtggttacg
acaacgacgcacaaaacgctacgggggccccgtggcggtatgattttagcgaaagaaaag
tatggcaagaagatcaactcagccgttttccctggcaatcagggtgggccgttggatcac
gtaattgcgggtaaagcgattgctttgggcgaagacttacagcctgagtttaaggtttat
gcccaacatatcattgataatgccaaggcaatggcgaaggtcttcaatgactctgacttg
gttcgggttatttctggtggcacggacaatcatttaatgacgattgatgtcactaagtct
ggtttgaacggtcgccaagtacaagatctgttagatacggtttatattacggtcaacaaa
gaagcgattccgaatgagacgttaggggctttcaagacctctggtattcggttgggaaca
cctgcgattacgacccgtggttttgacgaagctgatgcaactaaggtcgctgaattgatt
ttgcaagcgttacaagcaccgacagatcaagcaaatctagatgacgttaaacagcaagca
atggctttaacagcgaagcacccgatcgatgttgattaa
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