Lactiplantibacillus plantarum JDM1: JDM1_2425
Help
Entry
JDM1_2425 CDS
T00946
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K18892
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JDM1_2425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpj02000
]
JDM1_2425
Transporters [BR:
lpj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JDM1_2425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA_30
DEAD
AAA_29
AAA_16
AAA_21
AAA_18
AAA_25
AAA_7
AAA_24
AAA_15
AAA_23
AAA_5
SLATT_4
DO-GTPase2
NB-ARC
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACT63312
LinkDB
All DBs
Position
complement(2602411..2604192)
Genome browser
AA seq
593 aa
AA seq
DB search
MSDLRNAGKYYWHYLKRYWLGFLLSVILIAFSTWCIVVAPTYLGRAVEELTQYLQQWTNQ
ATRAQASLQPFNRTLIIYVLLYVGDASTIFIASLILARVTAFSTGTMRVGLFRKMQRMKV
QYFDTHSDGDILARFTSDLDNIFNAMNQALLEILLAVAQFVGLLIVMFNQNTTMAWVTMA
STPVALIIAAFVMHKAGVAVNQQQDDIGQLNGYINEQITGQKVLITNGLQQDSLKGFHQY
NGKVRQSALTGQIWSGILNPLMQGMSLLNTAIVIFFGSWLALNGSMSTGAALALVVVFVN
YAQQYYQPIMSLTSLYSMIQLAITGARRVDEVRNQPDEVSPANGKALDGIHDELLIDNVR
FSYLPGKEILHGVSIHVHRGEMVALVGPTGSGKTTVMNLLNRFYDVDSGAITFDGVNIQD
FDLQVLRQNVGIVLQEPQLFTGTIADNIRYGDPTASMDRVIDAAKQANIHDFVMSLPDGY
QTRVSDEQSIFSAGQKQLMSIARTILTNPKLLILDEATSNVDTVTEANIQAAMDNVIQGR
TSFVIAHRLKTILNADKIVVLKDGQIIEQGNHHDLLAANGFYAELYRNQMVFE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttacgcaatgctggtaaatattactggcactatttaaaacgctactggtta
ggcttcttactaagtgtgattctgattgccttttcgacttggtgcattgtggtcgcaccg
acttatctgggacgagccgtggaggagctgacgcagtacttgcagcagtggacgaatcaa
gcgactcgggcacaagcaagcttgcaaccgttcaaccggaccctgatcatctacgtcttg
ttgtatgtcggtgatgctagcacgatttttattgcgagcttgatcttagcacgcgtgacg
gccttttcgaccgggacaatgcgggtaggcctatttcggaagatgcaacggatgaaggtt
caatactttgatacgcatagtgacggggatattctggctcggttcacctctgacctagat
aatatttttaatgccatgaatcaagccttgctagaaattttattagccgtggctcagttt
gttggcctgctaattgtgatgtttaatcaaaacactacgatggcgtgggtgacgatggct
tctacgccggttgcattaattatcgcggcgtttgtcatgcacaaggctggcgtcgcggtg
aaccaacaacaggatgatatcggtcaactgaatggttatatcaatgaacaaattaccggt
caaaaagtcttgattaccaacggcttacagcaggactccttgaaaggctttcatcagtat
aatggtaaggttcgccagtcagcgttgacgggtcaaatctggtcaggtattttgaatcca
ctgatgcaagggatgtcactgcttaacacggcaattgtcatcttctttggctcatggtta
gcgctgaatgggagtatgtcgactggagcagctttggcgctggtcgtggtgttcgttaac
tacgcccaacagtactaccagccaattatgtcattgactagtttatatagtatgattcag
ttagcgattactggtgcacggcgggtcgatgaagtccgtaatcaaccggatgaagtgagc
cccgctaacggtaaagcgctcgacgggattcatgatgaattactgattgataatgtgcgc
tttagttacttaccaggtaaagaaatcttgcatggcgtgtcgatccatgtgcaccgcggt
gagatggtggcactcgttggcccaactggttcggggaaaacgacggtcatgaatttgttg
aatcgcttctatgatgttgatagtggtgcgattacgtttgatggggtgaatattcaagac
tttgatctccaggtgctacggcaaaatgtcgggattgtcttacaggaaccccagttgttt
acgggcacgattgcggataatattcgttacggggacccaacggctagtatggatcgggtc
atcgatgcggcgaagcaggctaatattcatgactttgtgatgagcctgccagatggctat
cagacgcgcgtttccgacgaacagagtattttttctgccggtcaaaagcagttgatgtca
attgcccggacgattttaacaaatcccaagttgctgattttggatgaagcgacttcgaac
gttgatacggtgacggaagccaatattcaagccgcaatggacaacgtcatccaagggcga
accagctttgtcattgctcaccgcttgaaaacaatcctgaatgccgataaaatcgttgta
ttgaaggatggtcaaattattgaacaggggaaccaccatgatttattagcggcaaacggc
ttctatgcggaactgtatcgtaatcagatggtctttgagtaa
DBGET
integrated database retrieval system
