Lactiplantibacillus plantarum JDM1: JDM1_2916
Help
Entry
JDM1_2916 CDS
T00946
Name
(GenBank) ABC transporter, ATP-binding and permease protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JDM1_2916
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpj02000
]
JDM1_2916
Transporters [BR:
lpj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JDM1_2916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
nSTAND3
DUF87
ATP-synt_ab
AAA_16
AAA_23
KAP_NTPase
DUF5906
AAA_22
AAA_30
AAA_29
NB-ARC
G-alpha
AAA_15
NACHT
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
ACT63802
LinkDB
All DBs
Position
3156995..3158743
Genome browser
AA seq
582 aa
AA seq
DB search
MNPYQWVWQYARHSRWQITLASLLIIVNALGVVAVPLLGGIIVDVVINQRHLNLLLPLLA
GMVGITLIRTVMRYCYIILWERVGQNSLYDIRHDLFTKLQSLDYPFFNSVTNGDIMARLT
GDTDAIRHFLCWVTYNTAECVLWFLTAVIVMGWLNWQLMLALIILTPIIAWLTTRMSTEA
HTVFFDIRQSFAHLNAMVEENISGNRIVRAFAREDYEIEKFQQLNHDYKEKNMASAAVSR
RYLPTLDFLASLLSVIVLLLGSILVINHQMSLGQLVSFNGFLWMLNQPMRMSGWLINDIQ
RFSAATIKIRSMLNTQPTIITTKSQQVVPIRGAVQFQHVDFAFPDTPQVNALLDINFTVE
PGQTLGILGETGSGKTTLMNLIARFYDPTNGRILIDGRDIQQWSAQDLRNQITIVTQDLF
LFSDTITDNINYGNHDASIPFIREMAAIADANNFIDQMPDGYDTVVGERGVGLSGGQKQR
ISLTRALVKDPRILILDDTTSALDMETEATIQQRLKAITKNETVFIIASRISSLRHADHI
IVLRHGEIIEQGNHESLLAQNGYYAETYRRQLGLIKDAKGDE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttatcagtgggtctggcaatacgcccggcacagccgctggcaaatcacacta
gctagtctcttaattatcgtcaatgcacttggtgtagtagcagtaccattattgggtggc
atcattgttgacgtggtcatcaatcaacgacatctcaacttgcttctgccgttattagca
gggatggtcggtatcacgttaattagaaccgtgatgcgttactgctacattatcctctgg
gaacgcgtcggtcaaaattcattgtatgacattcgccatgatttattcacgaaattgcaa
tccttagattaccccttcttcaactctgtcactaacggcgatattatggctcggttaact
ggtgatactgatgcaatccgacactttctatgctgggttacctataacaccgccgaatgt
gtcctatggttcttaactgccgtgattgtcatgggttggctcaactggcaattaatgctc
gcactaattatcctaacacccattatcgcctggttaacgacacgcatgagtaccgaagca
cacactgtcttctttgacatccgtcagagcttcgcccacttgaatgccatggttgaagaa
aacatttcaggtaatcggatcgtgcgggcctttgcccgtgaagattatgaaatcgagaag
ttccagcaactcaatcatgattacaaggaaaagaacatggcctccgctgccgtttctagg
cggtacctaccgactttagattttcttgcatccttgttatcagtcattgttttactgctc
ggaagtattctcgtgattaatcaccagatgagcctaggacaactggtttcgtttaacggc
tttttatggatgctcaaccaaccgatgcgtatgagtggctggttaattaacgatattcag
cgcttttcagccgcaactattaaaatccgttcaatgctgaacacgcaaccaacaatcata
accactaaatcacaacaagtggttcctattcgaggcgctgtccagtttcagcacgtcgac
tttgctttcccagatacacctcaagtcaacgcacttttggatattaattttactgtcgaa
ccaggacaaacgctcggaatccttggtgaaactggctctggaaaaacaacgttaatgaat
ctcattgctcgtttttatgatcccacgaacggccgtatcttaattgacggacgcgatatt
cagcagtggtcggcccaagacttacgaaaccaaattacgattgtaacgcaagatcttttc
ttgttctcggacaccattaccgacaatattaattacggcaatcacgatgcgtcaatacca
tttatccgcgagatggcggctatcgctgatgccaataacttcatcgatcagatgcctgac
ggttatgataccgttgtcggtgaacgaggcgttggtctctcaggtggtcaaaaacaacgg
atctctctaacccgagcacttgttaaagatcctcgtattttgattctagatgatacgact
agcgctctcgatatggagactgaagcaaccattcaacaacgattgaaagcgattacaaaa
aatgagacagtcttcatcattgcctctcggatttcctcactccgccatgctgatcacatc
attgttctacgtcatggtgagattatcgaacaaggcaatcatgaatctttacttgctcag
aacggctactatgcagagacttatcgtcggcaactcggactaattaaagatgcgaaagga
gatgagtag
DBGET
integrated database retrieval system
